Poecilia latipinna (sailfin molly): 106958279
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Entry
106958279 CDS
T08005
Symbol
hfm1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plai03036
]
106958279 (hfm1)
Enzymes [BR:
plai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106958279 (hfm1)
Chromosome and associated proteins [BR:
plai03036
]
Eukaryotic type
Meiosis-specific proteins
Others
106958279 (hfm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
106958279
NCBI-ProteinID:
XP_014905573
LinkDB
All DBs
Position
Unknown
AA seq
1511 aa
AA seq
DB search
MFDADDCTVSLDSLFFEKPTVHKVKPLPLESSQWQLDAPPPLTHIPATQDMQQEVESLSA
LYSFTQKPKKFQPPFKGLNASSSKINSFYSFNDEERRFEETQGDCTSNFRGNNGCSGDDG
LKDYPDGSFLSGGGGDETRLDSCHAAISRCLPGLPLRRSLFRSPTLSGAGDLSTNVDLKS
RSGNGGGGEKTFRPQTFLSPVAMATVPPALQLPQAAPFSCSSAPRVRPLQQVPHAETPDK
GAKRAFVPPMTPQPLHLQGSSGSEVLRPVSEIPVKFRSIFSEFPFFNYVQSKALDDVLYT
NKNFVACAPTGSGKTVLFELAIIRLLMETQEPWRDVKAVYMAPIKALCSQCYDSWSKKFG
PLGLTCKELTGDTEIDDLFEIHDSHIILTTPEKWDSMTRKWKDNSLLQLVRLFLIDEVHV
VKDATRGATLEVVVSRMKAVNSYRTSQNPEGGVTMRLVAVSATIPNICDIADWLSNGSEP
ASYLSMDESHRPVKLRKVVLGFPCSGTQTEFKFDLSLNYKMANIIQTYSDQKPTLVFCST
RKGAQQSAAVLAKDARFIMSFEHKQRLMKYANSILDSKLRDLMMLGVGYHHAGVDLSDRK
LVEEAFTLGDLPVLFTTRTLAMGVNLPAHLVVIKSTMQYVAGSCEEYSEADILQMIGRAG
RPQFDTSATAVIMTKVHTREKYMKLMNGIEIIESSLHSHLVEHLNAEIVLRTISDVNMAL
DWIRSTFLYIRALKNPSHYGFSANLDRYGIEAKLQELCLKTLNSLSAIDLITMDEDINIK
PTEAGRLMARYCVAFETVQLFTKVTGSETLPDLVDLVSKSKEFRDVQLRVNEKKTLNTLN
RDKNRATIRFPLEGKIKTSEMKVNCLIQAQLSSISIQDFGLTQETAKIFRIGMRITKCLS
EFLTQQSKTGFCAALSSLILAKCFRAKLWENSPFVSKQMEKIGLTLSTAMVNAGLTSFSK
IEQTNPRELELILNRHPPFGNQIRESVVHLPKYDINLEQLPRYSSTTAEIVVKVTLQNQA
QLLSRRTAPDHHYVSLIIGNSENHVVILHKLKDSLLLKSGSWTKKVDVPKASKGNEISVN
LISSEYVGLDIQLKFPVYYSAAAQNLGTEIPQSKTDNLVGQRAQHSHCSETQKTSSAKKQ
DSASKRQCNHFCKNKNLCAHDCCKVGVAVGQKRSANHESSFSSYLEDLRNRSDVLAQTPV
KRLKIKMSEEPLSVSMKRFAYKPRETLPSGSWHAGNGHKSADMELTAEHYAELPDVVCLE
DFDRDYCFYAEDGPEGLAEISQTSPAAPAYHQNSSKWMTLKSGSGSRPPPNQISTVSSAS
SGWSTAVPEQKKPYKSPSSLQIPSVTFDLGNEWDDWRDFDDENLLNASETSPPPCESSFQ
PQMQQHVQNKISAPVLISSSQAEPCMTTFTTSLRLISNPSPEVRKVGPSSISQSFTSQKR
ISLDWDKQRPNVFSDVFNVKTPEKLPAHTLGGQVSRRLDFFSAMNATSSANLPLHKSKEE
EAFLGIFDGIF
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgcagatgactgcacggtgtccttggacagtctgttttttgagaagcctact
gtacacaaggtaaaaccattgcctctggaaagcagtcagtggcagttagatgcacctcca
cctcttacacatatcccagccactcaggacatgcaacaggaggttgaatctctctctgcc
ttgtacagtttcacacagaaacccaagaagttccagcctccttttaaaggactcaatgcc
tcttcatcaaaaatcaatagtttctacagttttaatgatgaagagagaagatttgaggag
actcaaggtgattgcaccagcaacttcaggggaaataatggttgctctggtgatgacggg
ctaaaggattaccctgacggtagttttctgagtggcggaggtggagatgaaacccggctg
gactcttgtcatgcggctatcagtagatgcttgcctggtctacctttaagaagaagcttg
ttcaggagtcctacgctgagcggcgcaggtgatttgtcgaccaacgtcgacctcaagtct
cgcagtgggaacggcggcggcggcgagaaaacattcagacctcaaacttttctcagcccg
gttgccatggcgaccgtgcctcctgctctccaactaccacaggctgctccgttctcctgc
tcgtctgcgccgagggtgcgacccctgcagcaggtgccacatgcagaaacgccggacaaa
ggtgcaaagagagccttcgttccacccatgacgcctcaaccgctgcacttacaaggatct
tctggctctgaagttctgcgtcccgtgtcagaaatcccagtgaaattcagatccatcttt
agcgagttcccctttttcaattacgtccaatccaaagctctggatgatgttctttataca
aacaagaactttgtagcctgtgctccgactggatcggggaaaacagttctgtttgagctc
gccatcattcgcctgttaatggagactcaggaaccatggagagatgtcaaagctgtgtat
atggctcccatcaaagcgctctgcagccagtgttatgacagctggagcaagaagttcggt
cctctggggctgacctgcaaggagctgaccggtgacacagagatcgatgacttgttcgag
attcatgactcccacatcatcctgaccacgcctgagaagtgggacagcatgacaaggaaa
tggaaggataattctctgctgcagcttgttagactcttccttattgacgaggttcatgtg
gtgaaggatgcaacccgtggcgccacgttagaagtggtggtgagcagaatgaaggcagtg
aattcatacaggacatctcagaacccagagggaggcgtcacaatgagattagtggctgtg
tcggccacaatccccaacatatgtgacatagctgactggctgtccaatgggagcgagccg
gcctcctatctgagtatggatgagagccaccgtccagtaaagcttcggaaggtggtcctg
ggattcccctgcagtgggacacaaacagagttcaagtttgatttatctctcaactacaag
atggccaacataatacagacatactctgaccagaagcctacgctagtgttttgctcaaca
aggaaaggagctcagcagtcggctgcagttctggccaaggatgcccgattcattatgagc
tttgaacacaagcaaaggttgatgaaatatgcaaactctattctggattcaaaactgaga
gatctgatgatgttaggagttggttaccaccatgcaggcgttgacttgtctgacaggaag
ctggtagaagaggccttcaccctgggagacctgcctgtcctatttacaacccggactctg
gctatgggggtgaaccttcctgctcacctggtggtcatcaagtcaacgatgcagtacgtt
gccggctcctgtgaagagtacagcgaggctgacatcctgcagatgattggccgggcgggt
cggcctcagtttgatacatcagcaactgcagtgatcatgaccaaggttcacaccagagag
aaatacatgaaacttatgaatgggatagagatcattgagagcagcttacatagtcacctg
gtggagcacctgaatgctgagattgttctccggaccatcagtgatgtcaacatggctctc
gactggatacgctccaccttcctgtacatcagagcccttaagaacccgtctcactacggt
ttctcagccaacttagacagatatggtattgaagcaaagttgcaagaactgtgtctgaag
accctcaactctctgtcggccattgatttgatcaccatggatgaggatatcaacatcaaa
cccacagaagctggcaggttgatggcgaggtactgtgtagcctttgaaacagtgcagctg
ttcaccaaagtaaccggcagcgaaacactgcctgacctggttgacctggtgtcaaagagc
aaggagttcagggacgttcagttgagagtaaatgagaagaaaaccctgaacaccttgaac
agagacaagaacagggccaccatcagatttccacttgagggaaagatcaaaaccagcgag
atgaaagtgaactgcttaattcaggctcagttgagctctatctcaattcaagactttggt
cttacacaagagactgcaaagatctttagaatcgggatgcgaatcaccaaatgcctgtca
gagtttcttactcagcaatctaagacggggttttgtgctgcacttagctccctgatctta
gctaagtgctttagagctaagctgtgggaaaactcaccttttgtttccaaacagatggag
aagataggtttgactctgtcaactgcgatggtgaatgctggcctcaccagtttcagcaaa
atagagcaaaccaaccccagagagctggagctgattcttaacagacatccgccatttgga
aaccaaatcagagaatctgtcgttcatcttccaaagtacgacattaacctggaacagctg
cccaggtacagcagtaccacagctgagattgtggtaaaggtgaccctacaaaaccaagcc
cagctgctgtccaggagaacagctccagaccatcactacgtctctctgatcattggcaac
tctgaaaaccatgtagtcattctacacaaactcaaggactcgttgctgctcaagtctggt
agctggaccaaaaaggtagatgtgccaaaggcttccaaaggaaatgagatcagtgtcaac
ctcatcagctcagaatatgtgggtctggacatccagctgaagtttcctgtgtactactct
gctgcagcccaaaatcttgggactgaaattccacaaagcaaaacagataatctagttgga
caaagagctcaacactcacactgctctgagactcaaaaaacctcatctgcaaagaagcaa
gactcagccagtaaaagacagtgcaatcatttctgcaaaaataagaacctctgtgctcat
gactgctgtaaagtaggtgttgctgtaggacagaaaaggtcagccaaccatgaatccagc
ttctcctcttacttggaggacctgaggaacaggtctgatgtacttgcacagacccctgtc
aaacgccttaagataaaaatgagtgaagagcctctgtctgtcagcatgaagaggtttgcc
tacaaacccagagaaacgcttccctctggctcgtggcatgcaggaaatgggcataaaagt
gccgacatggagctgacagctgaacactatgctgagctgcctgatgtagtttgtctggag
gattttgacagagattactgtttctatgcagaagacggtcctgagggattggcagagatt
tcccaaacttctcctgcggcacctgcttatcatcaaaattcctcaaagtggatgaccctg
aaatccgggtcgggctccagaccgcctccgaaccagatcagcacagtcagctcagcttcg
tcgggctggtccactgcggtgccagaacaaaaaaaaccctacaaaagtccttcatctctc
caaataccaagtgtcacctttgacctgggaaatgaatgggatgactggagagattttgat
gatgaaaacttgctgaatgccagtgaaacatcaccacccccatgtgaaagcagctttcag
cctcagatgcagcagcatgttcaaaacaagatatcagcaccagtgctgatcagcagctca
caagcagagccctgtatgactactttcactacatcactgaggttgatttcaaatccaagt
cctgaagtcaggaaagttggaccctcttctatcagtcagtcgttcacatcacaaaagagg
atttcacttgactgggataaacagagaccaaatgttttcagtgatgttttcaatgtaaaa
acacctgaaaaactcccagcacacactctgggtggacaggttagcagaaggttggatttc
ttctctgcaatgaatgcaacatccagtgccaacctgcctcttcataaaagcaaagaggag
gaagctttccttggcatatttgatggtatattctag
DBGET
integrated database retrieval system
