Poecilia latipinna (sailfin molly): 106958572
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Entry
106958572 CDS
T08005
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03020
RNA polymerase
plai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106958572 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
106958572 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plai03021
]
106958572 (polr2b)
03400 DNA repair and recombination proteins [BR:
plai03400
]
106958572 (polr2b)
Enzymes [BR:
plai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106958572 (polr2b)
Transcription machinery [BR:
plai03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106958572 (polr2b)
DNA repair and recombination proteins [BR:
plai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106958572 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
106958572
NCBI-ProteinID:
XP_014906011
Ensembl:
ENSPLAG00000023984
UniProt:
A0A3B3TIH6
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDQDEDNQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLSGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMM
ARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFRALGFVSDRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKERRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEIRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDVKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKRRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEIFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPENEDELDSTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTVGHLIECLQGKVSANKGEIGDATPFNDAVNVQKVSNLLSEYGY
HLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHMVDDKIHSRARGPVQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccaggacgaagataatcagtacgatgaagatgatgatgaaattactcctgat
ctgtggcaggaagcctgttggattgtcatcagctcttattttgacgagaagggcctggtg
cggcagcagctggactcgttcgatgagttcatccagatgtcggtccagcggatcgtggag
gacgctccgcccatcgacctgcaggccgaggcgcagcacacctcaggggaggtggaggag
ccgccacgctacctgctgaagttcgagcagatctacctatccaagccgacccactgggag
cgggacggcgctccgtcccccatgatgcccaatgaggcccgcctccggaacttgacgtac
tctgcgccgctgtacgttgacatcactaagacgatcatcaaggagggtgaggagcagctg
cagacgcagcatcagaagacattcatcggtaaaattcccatcatgctccgctccacctac
tgcctgctgagcggcctgaccgaccgcgacctgtgcgagctcaacgagtgtccgctggac
ccgggaggctacttcatcatcaacggctccgagaaggtgctgattgcgcaggagaagatg
gccaccaacacggtctacgtcttcgccaagaaggactcgaagtacgcgtacacgggtgaa
tgccggtcctgcctggagaactcgtcccggcccaccagtaccatctgggtcagcatgatg
gcccgtggaggacagggggtgaagaagagcgccatcgggcagcgcatcgtgtccacgctg
ccgtacatcagacaggaagtgcccatcatcattgtgtttcgggcgctgggcttcgtgtcc
gacagagacatcctggagcacatcatctacgacttcgatgacccggagatgatggagatg
gtgaagccgtcgctggacgaggcgtttgtgatccaggagcagaacgtggcactgaacttc
atcgggtccagaggcgccaagcccggcgtgacaaaggagcggcgcatcaagtacgccaag
gaagtcctgcagaaggagatgctgccgcacgtcggcgtcagcgacttctgcgagaccaag
aaggcctacttcctggggtacatggtccaccggctgctcctcgccgctctgggccggcgg
gagctggatgacagggatcactatggcaacaagaggctggacctggctggaccgctgctg
gccttcctgttcagggggatgttcaagaacctcctgaaagagatccggatctacgcccag
aagttcatcgaccgagggaaggactttaacctggagctagccatcaagacgcggatcatc
tccgacggactcaagtactccctggccaccggcaactggggcgacgtcaagaaggcccac
caggcccgcgccggcgtgtcccaggtgctgaaccggctcaccttcgcctccacgctgtcc
cacctgcgccgggtcaattcccccatcggccgcgacggcaagctggccaagccgaggcag
ctgcacaacacgctgtggggcatggtgtgccccgccgagacgcccgagggccacgccgtg
ggtctggtgaagaacctggccctcatggcctacatctcggttggctcgcagccgtctccc
atcctggagttcctggaggagtggagcatggagaacctggaggagatttccccggctgcc
attgccgatgctacgaagatcttcgtgaacggctgctgggtgggaatccacaaagaccca
gagcagctgatgaacacgctgaggaagctccgcaggcagatggacatcatcgtgtcagag
gtgtcgatgatccgagacatccgggagcgggagatccggatctacacagacgccgggcgg
atctgccgaccgctgctgatcgtggagaagcagaagctgctgctgaagagacggcacatc
gaccagctgaaggagcgagagtacaacaactacagctggcaggacctggtggcgagcggc
gtggtggagtacatcgacaccctggaggaggaaaccgtcatgctcgccatgacccctgat
gacctccaggagaagggcgtggcctactgctccacctacacccactgtgagatccacccg
tccatgatcctgggagtctgcgcctcaatcatcccgttccccgaccacaaccagtctccc
aggaacacgtaccagtccgccatggggaagcaggccatgggcgtctacatcaccaacttc
cacgtgaggatggacacgctggcccacgtgctgtactacccccagaagccgctggtcacc
acgcgctccatggagtacctgcgcttccgggagctgccagcaggaatcaactccatcgtc
gccatcgcctcctacacgggctacaaccaggaggactcggtcatcatgaaccgctcggct
gtggaccgcggcttcttcaggtccgttttctaccggtcctacaaggagcaggagtccaag
aagggcttcgaccaggaggaaatctttgagaagccgacccgcgagacgtgtcaggggatg
aggcatgccatctatgacaagctagacgacgacgggctgatcgcgcccggcgtccgcgtg
tccggggaggacgtgatcatcgggaagacggtgacgctgccggagaacgaggacgagctg
gacagcaccaaccgccgctacaccaagagggactgcagcaccttcctgcgcaccagcgag
accggcatcgtggaccaggtcatggtgacgctcaaccaggagggatacaagttctgcaag
atccgggtccgttcagtccggatccctcagattggagacaagtttgccagccgccacggg
cagaagggaacctgcgggatccagtaccgacaggaggacatgccgttcacctgtgaaggc
atcacacctgacatcatcatcaaccctcacgccatcccgtccagaatgacagtcggccat
cttatcgagtgtctgcaggggaaggtgtcggccaacaaaggggagatcggcgacgccacg
ccgttcaacgacgccgtcaacgtgcagaaagtgtccaacctgctgtccgagtacggctac
cacctgagaggaaacgaggttctgtacaacggcttcacggggaggaagctgacgtcccag
atcttcatcggaccgacctactaccagcggctgaagcacatggtggacgataagatccac
tcccgggcccgcgggccggtccagatcctgaaccgccagccgatggagggccgctcccgt
gacggcgggctgcgtttcggggagatggagcgggactgccagatcgcccacggcgccgcc
cagttcctccgggagcggctgttcgaggcgtccgacccgtaccaggtccacgtctgcaac
ctgtgcggcctgatggccatcgccaacaccaggacgcacacctacgagtgtcggggctgc
cgcaacaagacgcagatctctctggtccggatgccatacgcctgcaagctgctgttccag
gaactgatgtccatgagcatcgctcctcgaatgatgacctcataa
DBGET
integrated database retrieval system
