Poecilia latipinna (sailfin molly): 106958578
Help
Entry
106958578 CDS
T08005
Symbol
nfkb1
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04010
MAPK signaling pathway
plai04210
Apoptosis
plai04218
Cellular senescence
plai04519
Cadherin signaling
plai04620
Toll-like receptor signaling pathway
plai04621
NOD-like receptor signaling pathway
plai04622
RIG-I-like receptor signaling pathway
plai04623
Cytosolic DNA-sensing pathway
plai04625
C-type lectin receptor signaling pathway
plai04920
Adipocytokine signaling pathway
plai05132
Salmonella infection
plai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
106958578 (nfkb1)
09133 Signaling molecules and interaction
04519 Cadherin signaling
106958578 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
106958578 (nfkb1)
04218 Cellular senescence
106958578 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
106958578 (nfkb1)
04621 NOD-like receptor signaling pathway
106958578 (nfkb1)
04622 RIG-I-like receptor signaling pathway
106958578 (nfkb1)
04623 Cytosolic DNA-sensing pathway
106958578 (nfkb1)
04625 C-type lectin receptor signaling pathway
106958578 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
106958578 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
106958578 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
106958578 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plai03000
]
106958578 (nfkb1)
Transcription factors [BR:
plai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
106958578 (nfkb1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_5
Ank_3
Ank_4
Death
Motif
Other DBs
NCBI-GeneID:
106958578
NCBI-ProteinID:
XP_014906019
LinkDB
All DBs
Position
Unknown
AA seq
978 aa
AA seq
DB search
MAADENYLHPSSQMFDMDPSFLEYSHFVPMPQMTALQSVDGPFLQILEQPKQRGFRFRYG
CEGPSHGGLPGASSEKNRKTYPTVKICNYQGQARVVVQLVTALTQLPQLHAHSLVGKQCD
KGICIADLQSKDSTISFPNLGILHVTKKNVAKTLEERMVEAFRMGYNCGVAIHPEVDALQ
GEVRVPRELSDHQRSMISSAAASQAKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVVSEPI
YDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEEDDSGLTWEALGD
FSPTDVHRQFAIVFKTPKYRDQNLQKPTSVFVQLKRKSDNETSEPKPFTYHPQIIDKEEV
QRKRQKTLPNFQDFSGHGGGGSGGGGGGGLYRGGGGPASGVGGPGSAGGGYYQGFSSFSY
GGAAGGFSSAYSAGLGGGGGTKHALQSEAADDSGDDSDPDNDPASGAVLRGSAQSGGSAQ
SDAPSVDPDEALMEATRRQLDALFRYSVTGDSAYLLAPQRPLMAAQDEDGDTGLHLAVLH
SQQEALTSLTQVVSALTGEEVLNMRNHLYQTPLHLAVITQQKQAAEVLLLAGADPTLTDR
QGNTVLHLAAQQEGDGMVELLLRRREMRELLQFSNTAGLCAIHLAVLANRLAALRELLVG
GADVEAQERSGGRTALHLATETDNVSLAGCLLLEGNAKVDSCTFNGSTPLHVAAGRGSIK
LTALLMAAGADPHRENFEPLFIRDEEEEDDEEEEDDEGYISGTTPVNMAASPEVLDLLNG
QEYEPRSQQAFIPPQGDLSVLDVQVKRAVCGALEAEGCWENLAHHLGLGILNTAFRLSPN
PARTLLESYEVSGGTVSDLLAALRSAGGCRALSILEGALHQNPDMAEEVQNPPVQNLKRT
LGTTAASATAGWSSPRRSALIGQHPQPPLHHSKILIYFKELLTQLDRDRTRPGQTGPDQA
GSNRTGSNRTRLLNSDLY
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgacgagaactacctgcacccctccagccagatgttcgacatggatccgtcc
ttcctggagtattcccacttcgtcccgatgcctcagatgacggctctgcagtcagtggat
ggaccatttctgcagatcctggagcagcccaaacagcgcggcttcaggttccgctacggc
tgcgaaggtccgtcgcacggcggtctgccgggagcctccagcgagaagaacaggaagacg
tacccgacggtgaagatctgtaactaccagggtcaggcccgggtcgtggtccagctggtg
acagcgctgacccagctgccgcagcttcacgctcacagcctggtggggaagcagtgcgat
aaaggcatctgcatcgctgacctgcagtccaaagactccaccatcagttttcccaacctg
gggatcctccatgtgaccaagaagaacgtggcgaagacgctggaggagcggatggtggag
gccttcaggatgggctacaactgcggggtcgccatccacccggaggtcgacgcgctgcag
ggggaggtccgggtcccgcgggagctcagcgaccaccagcgcagcatgatcagcagcgcc
gcagcctctcaggccaaagagatggacctgagcgtggtgcgcctcatgttcaccgccttc
ctgcccgacagcgacggcggcttctccagacgcctggagcccgtggtgtccgagcccatc
tacgacagcaaggctccaaacgcctcaaacctgaagatcgtcaggatggaccggaccgcc
ggctgcgtgacggggggagaggaggtctacctgctctgtgacaaggtccagaaagatgac
atccaggtgcggttctacgaggaggacgactcaggcctgacctgggaggctctgggcgat
ttctcccccacagacgtccacagacagtttgccatcgtcttcaagaccccgaagtatcga
gaccaaaacctgcagaagccaacgtctgtcttcgtccagctaaagaggaaatccgacaat
gagaccagcgagcccaaaccattcacctaccatccgcagatcatagataaagaggaggtt
cagaggaagaggcagaagacattgccaaacttccaggacttcagcggccatggaggagga
ggaagtggaggaggaggaggcggggggctgtaccgaggtggaggaggtccggcttcagga
gtaggaggtccaggctcagcaggaggaggatactaccagggtttctcctccttcagctac
ggaggagcagcaggaggattctcctcagcgtactcagctggtcttggaggaggcggcggc
acaaagcatgctttgcagagtgaagctgcagacgacagcggcgacgacagtgacccagac
aacgacccggcgtcgggcgctgtgctacgaggctccgcccagtcaggaggttccgcccaa
tcagatgcccccagtgtggatccagacgaggcgctgatggaggcaacccgcaggcagctt
gacgctctcttccgatactctgtcaccggcgactcggcgtacctgctggctccacagcgc
cctctgatggcggcacaggacgaagacggagacactgggctgcatctggcggtgctccac
agccagcaggaggcgctgacgagtctgacgcaggtggtgtccgctctgacgggagaagag
gtgctcaacatgaggaaccacctgtaccagactcctctgcacctggcggtcatcactcag
cagaagcaggcggctgaagtgctgctgctggccggcgccgacccgactctgacagatcgc
caaggcaacacagttcttcacctggcggcgcagcaggaaggagacgggatggtggagctt
ttactgcgacgcagagagatgagagagctgctgcagttcagcaacacagcaggtctgtgt
gccatccacctggcggttctggccaatcgcctggcggcgctgagggagctgctggtgggc
ggggccgacgtcgaggctcaggagcgcagcggcggacgcaccgcgctgcacctcgccacg
gagactgacaacgtgtcgctggccggctgcttgctgctggagggaaacgccaaggtggac
agctgcaccttcaacggctccacccccctgcatgtggccgcggggcggggctccatcaag
ctgacggctctgctgatggctgcaggtgctgacccgcacagggagaactttgagccgctc
ttcatcagggacgaggaagaggaggacgatgaggaggaagaggatgatgaaggctacatc
tcaggaaccactccagtcaacatggccgcctcccctgaggttctggatcttctaaatggt
caggagtacgagcccaggagccagcaagccttcatcccgccacagggcgacctgtcagtt
ctggacgtgcaggtgaagcgggccgtgtgcggcgctctggaggctgaaggatgctgggag
aacctggctcaccatctgggcctcggcatcctgaacacggcattccggctgagtccaaac
ccggccagaaccctgctagagagctacgaggtttctggtggaaccgtttcggacctgctg
gcggctctccggtcggcaggcggctgcagagcgctgagcatcctggagggggcgctgcac
cagaacccggacatggcagaggaggtccagaaccctccggtccagaacctgaagcggacc
ttgggaacgacagcggcgtctgcgacagcggggtggagctctccacggcgtagcgctctg
attggccagcatcctcagcctcctcttcatcactcaaagattctcatctattttaaggaa
ctgctgacacaactggaccgggaccggaccaggccgggtcaaaccggaccggaccaggcc
ggctcgaaccggaccggatcgaaccggaccagactgctgaactctgatctctactga
DBGET
integrated database retrieval system
