KEGG   Poecilia latipinna (sailfin molly): 106958742
Entry
106958742         CDS       T08005                                 
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
plai  Poecilia latipinna (sailfin molly)
Pathway
plai03030  DNA replication
plai03410  Base excision repair
plai03420  Nucleotide excision repair
plai03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:plai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106958742 (rfc2)
   03410 Base excision repair
    106958742 (rfc2)
   03420 Nucleotide excision repair
    106958742 (rfc2)
   03430 Mismatch repair
    106958742 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:plai03032]
    106958742 (rfc2)
   03036 Chromosome and associated proteins [BR:plai03036]
    106958742 (rfc2)
   03400 DNA repair and recombination proteins [BR:plai03400]
    106958742 (rfc2)
DNA replication proteins [BR:plai03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    106958742 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    106958742 (rfc2)
Chromosome and associated proteins [BR:plai03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    106958742 (rfc2)
DNA repair and recombination proteins [BR:plai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     106958742 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    106958742 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 AAA_16 Viral_helicase1 RCF1-5-like_lid Mg_chelatase AAA_24 Rad17 AAA_11 RuvB_N AAA_19 DEAD AAA_assoc_2 nSTAND3 MipZ AAA_18 AAA_5 ABC_tran MeaB AAA_30 AAA_28 DNAX_ATPase_lid AAA_25 NTPase_1 RNA_helicase MCM AAA_2 SLFN-g3_helicase FtsK_SpoIIIE bpMoxR DUF815
Other DBs
NCBI-GeneID: 106958742
NCBI-ProteinID: XP_014906290
Ensembl: ENSPLAG00000020535
UniProt: A0A3B3UUP3
LinkDB
Position
Unknown
AA seq 357 aa
MDVEMADRESDQKPSGSGVKTDTEAGESSSKSSGSSYELPWVEKYRPLKLNEIVGNEETV
SRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARTLLGAAMKDAVLELNASNDRGIDVVR
NKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKI
IEPIQSRCAVLRYAKLTDGQVLARLQEVVEREELAVSDDGLEAVIFTAQGDMRQALNNLQ
STHSGFGYINSENVFKVCDEPHPLLVKSMLGHCVAGDVDAAYRVVEQLWALGYSPEDIMG
NIFRVCKTFQMAEYLKLEFIKEIGFTHMRVAEGVNSLLQMAGLLGRLCSKTAPPAAS
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggacgtcgagatggcagacagggaaagtgaccagaagccgagtggaagcggggtaaag
acggacaccgaggccggggagtcctcgtcgaaaagctccgggagttcctacgagctgccc
tgggtggagaagtaccggccgctgaaactgaatgagatagttgggaacgaggagacagtg
agccgcctggaggttttcgccagggaaggaaacgtcccgaacatcatcatagcaggacct
ccagggacagggaagaccaccagcatcctgtgtttggcccgcactctgctgggggccgcc
atgaaggacgccgtgttggagctcaacgcttccaacgacaggggcatagatgtggtgaga
aacaagatcaagatgttcgctcagcagaaagtcacgctgcccaaaggtcgacacaagatc
atcatcctggatgaagcggacagcatgacggatggcgctcagcaggcgctcaggaggatc
atggagatctactccaaaactacgcgcttcgctctcgcctgcaacgcctctgacaagatc
atcgagccgatccagtcgcgctgcgccgtgctacgctacgccaagctgacagacggccag
gtgctggcccgcctgcaggaagtggtggagcgagaggagctggccgtgtctgacgacggg
ctggaggccgtcatcttcacagcgcagggggacatgcggcaggcactgaacaacctgcag
tccacccactctggcttcggttacatcaacagcgagaatgtgttcaaagtgtgcgacgag
ccgcatcccttgctggtgaaaagcatgctggggcactgcgtggccggggacgtggacgcg
gcgtaccgggtggtggagcagctgtgggcgctgggctactcccccgaggacatcatgggg
aacatcttcagggtctgcaaaaccttccagatggccgagtacctaaagctggagttcatc
aaggagatcggcttcactcacatgcgggtggctgaaggagtgaactccctgctgcagatg
gccggcctgctgggaagactctgcagcaagacggcgccccctgctgccagctga

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