KEGG   Poecilia latipinna (sailfin molly): 106958912
Entry
106958912         CDS       T08005                                 
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
plai  Poecilia latipinna (sailfin molly)
Pathway
plai03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:plai00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    106958912 (pcdh20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:plai01009]
    106958912 (pcdh20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:plai04515]
    106958912 (pcdh20)
Protein phosphatases and associated proteins [BR:plai01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106958912 (pcdh20)
Cell adhesion molecules [BR:plai04515]
 Cadherins
  Protocadherins
   106958912 (pcdh20)
SSDB
Motif
Pfam: Cadherin Cadherin_CELSR2_9th Cadherin_2 DUF6899 TM_ErbB1
Other DBs
NCBI-GeneID: 106958912
NCBI-ProteinID: XP_014906571
Ensembl: ENSPLAG00000016367
LinkDB
Position
Unknown
AA seq 887 aa
MFRSRYSSKRDSIWGFYILMLYTTPLSCLANFSQAKELIYKIKEGLPKGTFIGAIGVDLR
LDFTVEPPFLFSLTQKKVSEQYVNINNTTGELYTSAAEIDRETLCPYSSEEQGCFLSLDV
FVLPQQYFQLVKVKLLIEDVNDNRPKFPTDEIRMSVPENTPINGRFAVEQSAIDPDLGIY
GVQTYWLVNDFGVFTLDVEENDGGELTPFLIVTNFLDRETQAEYVTDIIAEDGGTPPLLG
AATLKIAITDVNDNCPKFTESQVNVTLHGNTSKGAQLARLHAFDPDLGANAQISYAYSER
VPRDTRSLFHLDKITGGIKLARKLDFITTTFYKLTVLANGPGCIPAVATVTVYITKVVTG
PPAVIPRYIAPEKDGVVTLKESEPAFSPIAFFTIKNMDKSQRVDCYLEGFGPFRLVPYQQ
LENEYLLETTETLDYERTQEYELILVANNTQGLIIKTFLKVQVLDENDNAPVFQQSLVEI
SIEENNSPNTFLTQLQASDPDSESRGEVIYILGGDTPGIFVVDRLTGVLTVATSLDREEK
EKYRFIVRAVDQGTPRRESIATVVVTVLDRNDNSPRFINKDFTFFVPENFPGYGEIGVLS
VTDPDAGKNGWVALSILNGSDIFMIDTGRGALRAKTSLDREQQGTYQLWIEAADGGVPAL
SSVTMVTVLLLDVNDNPPVVLFPQSNQSYMLVLPDTTPGTSIAEVYAVDKDTGMNAVIAY
SIIKRKGGEPGSFAIDPETGNITLKRELSNRGLYSLLVKVSDHGQPEPLYSTVMVNFFVN
ETVSNESYIQSLLTRDVDIEVEEKPWYISQMTDGPERYELVPCRPIVISLSVACLGLFSL
VLILISYICCKRFKKMRKKRSEVEVPLKLKNGSTNFLNRKLRQMSNI
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgttcaggagcaggtactccagcaaacgagacagcatatggggtttctacatccttatg
ttgtacaccacccccctctcatgtctggcaaatttcagtcaagcaaaagagctcatctat
aagataaaggagggattacccaaggggactttcatcggggctattggagtggacttacgt
ttggatttcacagttgagcccccctttttattcagtctcactcaaaagaaggtcagtgag
cagtatgtgaacataaataatactactggggagctttacacatccgctgctgagattgac
agggagaccctctgtccttacagctcagaggagcagggatgtttcctttcactggacgtg
tttgtgttgcctcagcagtactttcagcttgtcaaagtaaagcttttaattgaagacgtg
aacgacaacaggccgaagttccccacagatgaaatccgcatgtctgtcccagaaaacaca
ccaataaatggccgttttgcggtggaacagtctgctattgacccggacctggggatttat
ggagtgcagacctactggctggttaacgactttggtgtgttcactctggatgtagaggag
aatgatggaggtgagctgacaccattcctcattgtgacaaactttttagacagagagacg
caagctgaatatgttacagatatcattgcagaagacggagggacccctccccttcttgga
gcagcaactttaaaaatcgccatcacagacgtaaatgacaactgccctaaatttacagag
tcacaggttaatgtcactctgcacgggaataccagcaaaggggcacagttggcacgtttg
catgcttttgaccctgaccttggtgctaatgcacagatcagctacgcttacagtgaacgt
gtgccaagggacaccaggagcttgttccatttggacaaaattacaggggggatcaagcta
gccaggaaactagacttcatcacaactacattttacaaactgacagttctggccaatgga
cctggctgcatccctgccgttgcaactgtaaccgtctatatcaccaaagtggttacagga
ccccctgctgtcatacctagatatatcgcacccgaaaaggatggagtggtgacattaaag
gagtctgagccagctttttctccaatcgcattttttactatcaaaaacatggacaaaagc
caaagggtggactgttatttggaagggtttggtccattcaggcttgtcccataccaacag
ttagagaatgagtatttactagaaacaacagagaccttggactatgagaggactcaggaa
tatgagctaattctggttgctaacaatactcaaggtctgatcataaagactttcctaaag
gtgcaggttttggatgagaacgacaatgcaccagtgtttcaacagtctttggtggaaata
tcaattgaggaaaataattcaccaaacacattcctgactcagctccaagcctcagaccca
gacagtgaaagtcgaggggaggtaatctacatccttggtggggatactcctgggattttt
gttgtggatcgtctgacgggggttctgactgttgcgacatctcttgacagagaggaaaaa
gaaaaatatcggttcatagttagagcagtagaccaggggacgcccaggagggagtcaatt
gctacggtggtggtgactgtactggaccgcaatgacaacagtccacgtttcattaacaag
gattttaccttctttgtgccagagaactttcctgggtatggggaaattggtgtcctctct
gtgacggatcctgatgctggtaaaaatgggtgggtagccctgtccatccttaatggcagt
gacatttttatgatagacactggccgaggtgcactgagggccaagacatccctagaccgt
gagcagcaaggaacgtaccagctgtggattgaggccgctgacggtggagtgccagcgctt
tcctctgttactatggtgactgttctcttgttggatgtgaatgacaacccgccagttgtt
cttttccctcagtccaaccagtcctacatgttggtgctacctgatacgacacctggaaca
tcaatagcagaagtgtacgcggtggacaaagacacagggatgaatgctgtgattgcctac
agtatcattaaaaggaaagggggtgagccagggtcatttgccatcgacccagaaacaggg
aacataacattaaagagagagctcagcaacagggggctttacagccttctagtgaaagtt
agtgatcacggtcaacctgaaccgctttactcaacggtcatggttaacttctttgtcaat
gaaacagtgagtaatgagagttacatccaaagtctgctgaccagggacgttgacatagaa
gttgaagagaagccctggtacatcagtcagatgacagatgggccagagaggtatgagctg
gtcccctgtcggcccatcgtcatcagtctttcagtggcgtgtctcgggttgttttccctg
gttctcatattgatatcatatatatgctgcaagagattcaaaaagatgaggaagaaaaga
tcagaagtggaagtacctttaaaattgaaaaatggctcgacgaactttctgaacagaaaa
ctcaggcagatgtcaaacatctga

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