Poecilia latipinna (sailfin molly): 106958912
Help
Entry
106958912 CDS
T08005
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
106958912 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plai01009
]
106958912 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plai04515
]
106958912 (pcdh20)
Protein phosphatases and associated proteins [BR:
plai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
106958912 (pcdh20)
Cell adhesion molecules [BR:
plai04515
]
Cadherins
Protocadherins
106958912 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
DUF6899
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
106958912
NCBI-ProteinID:
XP_014906571
Ensembl:
ENSPLAG00000016367
LinkDB
All DBs
Position
Unknown
AA seq
887 aa
AA seq
DB search
MFRSRYSSKRDSIWGFYILMLYTTPLSCLANFSQAKELIYKIKEGLPKGTFIGAIGVDLR
LDFTVEPPFLFSLTQKKVSEQYVNINNTTGELYTSAAEIDRETLCPYSSEEQGCFLSLDV
FVLPQQYFQLVKVKLLIEDVNDNRPKFPTDEIRMSVPENTPINGRFAVEQSAIDPDLGIY
GVQTYWLVNDFGVFTLDVEENDGGELTPFLIVTNFLDRETQAEYVTDIIAEDGGTPPLLG
AATLKIAITDVNDNCPKFTESQVNVTLHGNTSKGAQLARLHAFDPDLGANAQISYAYSER
VPRDTRSLFHLDKITGGIKLARKLDFITTTFYKLTVLANGPGCIPAVATVTVYITKVVTG
PPAVIPRYIAPEKDGVVTLKESEPAFSPIAFFTIKNMDKSQRVDCYLEGFGPFRLVPYQQ
LENEYLLETTETLDYERTQEYELILVANNTQGLIIKTFLKVQVLDENDNAPVFQQSLVEI
SIEENNSPNTFLTQLQASDPDSESRGEVIYILGGDTPGIFVVDRLTGVLTVATSLDREEK
EKYRFIVRAVDQGTPRRESIATVVVTVLDRNDNSPRFINKDFTFFVPENFPGYGEIGVLS
VTDPDAGKNGWVALSILNGSDIFMIDTGRGALRAKTSLDREQQGTYQLWIEAADGGVPAL
SSVTMVTVLLLDVNDNPPVVLFPQSNQSYMLVLPDTTPGTSIAEVYAVDKDTGMNAVIAY
SIIKRKGGEPGSFAIDPETGNITLKRELSNRGLYSLLVKVSDHGQPEPLYSTVMVNFFVN
ETVSNESYIQSLLTRDVDIEVEEKPWYISQMTDGPERYELVPCRPIVISLSVACLGLFSL
VLILISYICCKRFKKMRKKRSEVEVPLKLKNGSTNFLNRKLRQMSNI
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggagcaggtactccagcaaacgagacagcatatggggtttctacatccttatg
ttgtacaccacccccctctcatgtctggcaaatttcagtcaagcaaaagagctcatctat
aagataaaggagggattacccaaggggactttcatcggggctattggagtggacttacgt
ttggatttcacagttgagcccccctttttattcagtctcactcaaaagaaggtcagtgag
cagtatgtgaacataaataatactactggggagctttacacatccgctgctgagattgac
agggagaccctctgtccttacagctcagaggagcagggatgtttcctttcactggacgtg
tttgtgttgcctcagcagtactttcagcttgtcaaagtaaagcttttaattgaagacgtg
aacgacaacaggccgaagttccccacagatgaaatccgcatgtctgtcccagaaaacaca
ccaataaatggccgttttgcggtggaacagtctgctattgacccggacctggggatttat
ggagtgcagacctactggctggttaacgactttggtgtgttcactctggatgtagaggag
aatgatggaggtgagctgacaccattcctcattgtgacaaactttttagacagagagacg
caagctgaatatgttacagatatcattgcagaagacggagggacccctccccttcttgga
gcagcaactttaaaaatcgccatcacagacgtaaatgacaactgccctaaatttacagag
tcacaggttaatgtcactctgcacgggaataccagcaaaggggcacagttggcacgtttg
catgcttttgaccctgaccttggtgctaatgcacagatcagctacgcttacagtgaacgt
gtgccaagggacaccaggagcttgttccatttggacaaaattacaggggggatcaagcta
gccaggaaactagacttcatcacaactacattttacaaactgacagttctggccaatgga
cctggctgcatccctgccgttgcaactgtaaccgtctatatcaccaaagtggttacagga
ccccctgctgtcatacctagatatatcgcacccgaaaaggatggagtggtgacattaaag
gagtctgagccagctttttctccaatcgcattttttactatcaaaaacatggacaaaagc
caaagggtggactgttatttggaagggtttggtccattcaggcttgtcccataccaacag
ttagagaatgagtatttactagaaacaacagagaccttggactatgagaggactcaggaa
tatgagctaattctggttgctaacaatactcaaggtctgatcataaagactttcctaaag
gtgcaggttttggatgagaacgacaatgcaccagtgtttcaacagtctttggtggaaata
tcaattgaggaaaataattcaccaaacacattcctgactcagctccaagcctcagaccca
gacagtgaaagtcgaggggaggtaatctacatccttggtggggatactcctgggattttt
gttgtggatcgtctgacgggggttctgactgttgcgacatctcttgacagagaggaaaaa
gaaaaatatcggttcatagttagagcagtagaccaggggacgcccaggagggagtcaatt
gctacggtggtggtgactgtactggaccgcaatgacaacagtccacgtttcattaacaag
gattttaccttctttgtgccagagaactttcctgggtatggggaaattggtgtcctctct
gtgacggatcctgatgctggtaaaaatgggtgggtagccctgtccatccttaatggcagt
gacatttttatgatagacactggccgaggtgcactgagggccaagacatccctagaccgt
gagcagcaaggaacgtaccagctgtggattgaggccgctgacggtggagtgccagcgctt
tcctctgttactatggtgactgttctcttgttggatgtgaatgacaacccgccagttgtt
cttttccctcagtccaaccagtcctacatgttggtgctacctgatacgacacctggaaca
tcaatagcagaagtgtacgcggtggacaaagacacagggatgaatgctgtgattgcctac
agtatcattaaaaggaaagggggtgagccagggtcatttgccatcgacccagaaacaggg
aacataacattaaagagagagctcagcaacagggggctttacagccttctagtgaaagtt
agtgatcacggtcaacctgaaccgctttactcaacggtcatggttaacttctttgtcaat
gaaacagtgagtaatgagagttacatccaaagtctgctgaccagggacgttgacatagaa
gttgaagagaagccctggtacatcagtcagatgacagatgggccagagaggtatgagctg
gtcccctgtcggcccatcgtcatcagtctttcagtggcgtgtctcgggttgttttccctg
gttctcatattgatatcatatatatgctgcaagagattcaaaaagatgaggaagaaaaga
tcagaagtggaagtacctttaaaattgaaaaatggctcgacgaactttctgaacagaaaa
ctcaggcagatgtcaaacatctga
DBGET
integrated database retrieval system