Poecilia latipinna (sailfin molly): 106958980
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Entry
106958980 CDS
T08005
Symbol
trpa1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plai04040
]
106958980 (trpa1)
Ion channels [BR:
plai04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
106958980 (trpa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
106958980
NCBI-ProteinID:
XP_014906670
Ensembl:
ENSPLAG00000015090
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MNFSRDVARQTSCYTYVIEDEDSALASLNAVELAEKGDLTLLENLVRKSPEVLCEKDECG
ASPLHHAAAGGHVSLIRFITSVIDPQELNSCDDQGNVPLHWAVERNKAESCRALMDLGAN
PNILNNALLSPLHLAVSLGHNSLLGMLLSYSVTNCNLQGDLGNTPLILACSLNNCEALNI
LLKHGAMLCTQNKLGHFAMHAAAFAGARKAMEVILKAGEEHGHNAVSHINYLDKSKSSPL
HLAVRGGNFETIRLCIATGAKIDQQQNDRCTPLHLACTQGAIEVVKLMLSTVDQVEDVIN
LTDGACQTPLHRATIFDHAELAEHLISLGSDLNSTDCKGNTPLLLATSCGAWKTVALLLS
KGANVNVKDKCGCNFLHLAILQPKGLKNLPEEVLQHSSVKALLNCEDNEGCTPLHYACRL
GIHDSVKNMLGLSGQVGLACKSKDKKSALHFAAQYGRINTCHRLLESITDSRLLNEGDER
GLTPLHLASKGGHTKVVQLLLRKGALFHSDYKGWSCLHHAASEGYTQTMDILLSANPKLL
DKTDEDGNTALHIAARSGHVAAVRMMLVRGAELVLNKNDTSFLHEALQNGRKEVVNAVID
SERIEEALRLFVPGSTQRCPILDMIEFLPEGCKHLLDRCVKESDDDHNSPDYHIEYDFRW
LQAPISQKLIEQGYAPKPLAAVNAMVQYNRIELLNHPVCKKYLGMKWVAYGSKAHVLNMF
LYLLGLLPLTNLIVTLRPSVNTTETGELDIVMVPTSFTEQSMFLSFCMVMVLITNVYSIG
KEVVQISQQRWSYFRDGSNQIDWMSAISSLLFVVPLMVNAEGSWHWQAGAVAILNSWIGF
LLYLQRFEGVGIYVVMFGEIMRTLLRIVMLFVYLMLAFSLAFHALMLNQEEFNSVPLSVI
QTFVMMVGELNYQNNFLDAYLNNELPFGVLTYVIFVNFVLLMPILLVNLMIGLAVGDIAE
VQRNASLKRIAMQIDLHTSLEDKLPYWFMKRVDKPSVTIYPNRKCSRHFLKQMISGEDER
SEVWTRLQSKSQSCTFVENELKKQKARMKEMSGMLEKQHCLLKLIIQKMEISSEAEESDG
PVTLKGSMWPSLGHSKARGRSTSRWVPLIKAIEANRK
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcagcagagatgtggcgcgccagaccagttgttacacgtacgtcatagaggat
gaagattcagccctggcaagtctaaatgcagtcgagttggcagagaagggggacctgacg
cttctagagaacctggtgaggaagagcccagaggtcctctgtgagaaagatgaatgcgga
gctagtcccctccatcatgctgctgcagggggccacgtctccctcattcgatttatcacc
tctgtcatagatccacaagagctgaacagctgtgacgaccagggcaacgtccctctgcac
tgggccgtggagaggaacaaagcagagagctgcagggccctcatggacctgggagccaac
cccaacatcctcaacaatgctctcctgtcccccctgcacctggcggtcagcctcggacac
aacagcctgttggggatgcttttatcctacagtgtgacaaactgcaacctgcaaggagac
cttggtaacaccccactaatactggcctgctctctcaacaactgtgaagctctgaacata
ctgctaaagcacggggccatgctctgcacacagaacaagctaggccattttgccatgcat
gctgctgccttcgcgggagcgaggaaagccatggaagtcattctgaaggctggagaagag
cacggccacaatgcagtgtcccacatcaactacctagacaagtccaagagcagccctctc
catctggccgtgcgtggggggaatttcgaaaccatccgtctctgcatcgccactggggcc
aaaatagaccagcaacagaatgatcgctgcacgcctcttcatttggcctgcactcagggt
gctatagaggtggtgaagctgatgctgtccactgtggaccaagtggaagatgttatcaac
ctgactgatggggcttgccagactcctctgcatagggctacaatatttgaccacgcggag
ctggcggagcacctgatttctttgggttctgatctgaacagcaccgactgtaaaggaaac
acccctttgttgttggcaaccagttgtggagcatggaaaactgtagctctgctgctgtcc
aaaggggccaatgtgaatgtgaaagacaaatgtggctgtaactttcttcacctggccatc
ctgcagcctaagggtctgaaaaacctcccagaagaagtgctacagcatagcagcgtgaaa
gctttgctgaactgcgaagataacgagggctgcacgccactgcactacgcctgcagactg
ggtatccatgactcagtgaagaacatgctgggcctctcgggtcaagttggccttgcatgc
aagtccaaagacaagaagtctgctcttcactttgctgcacaatacgggcgcatcaacacc
tgccacaggttgctggagtccatcacagactctcgtctgctaaacgaaggtgacgagcga
ggcctgacgccactccacttggcttccaagggggggcacaccaaggtggttcagctgttg
ctgcgcaaaggagctctctttcacagtgattacaaaggctggagttgtctacaccatgcc
gcctctgaaggatacacacaaactatggatatactgctctctgcaaaccccaagttattg
gataaaaccgatgaggatgggaacactgcactccatatcgctgcgagatctggacatgtg
gctgcagtcagaatgatgctggtcagaggggctgagcttgtgctgaacaagaatgacact
tcctttcttcacgaagcgctgcagaacgggagaaaagaagtggtcaacgctgtgattgac
agcgaaaggattgaggaggctttgcgactgtttgttcccggttccacccaacgatgcccc
attcttgacatgattgaatttctgcctgagggctgcaagcatctgcttgaccgctgcgtg
aaggagtctgatgatgaccacaacagccctgactaccatattgaatatgatttcagatgg
ctgcaggctcccatttcgcagaagctgattgagcagggctacgctcctaagcctctagcc
gcagtcaatgcgatggtgcaatataaccgcatcgagctcctcaaccacccagtctgcaaa
aagtatctgggaatgaaatgggttgcctacgggagcaaagctcatgtgctcaacatgttt
ctgtacctgttagggctgctgcccttaacaaacctgatagtgacccttcgaccctctgta
aacaccaccgagacaggcgaactcgacatcgtcatggttcccacttcattcacagagcaa
agtatgttcttgtccttctgcatggtgatggtcttgatcactaacgtctattctattgga
aaagaagtggtgcagatatcacagcagcgttggagttacttcagggacgggtcgaaccag
atagactggatgtcggctatcagctctcttttgttcgtcgttcccctcatggtcaacgca
gaaggttcttggcactggcaagcaggcgcagtggccattttaaactcctggattgggttt
ctcctttatctccagaggtttgagggtgttggcatttatgtcgtgatgtttggggagatc
atgaggacattgctccgtatcgtgatgctgtttgtgtatctgatgttggcgttcagcttg
gcgttccacgctctgatgctcaaccaggaagagtttaacagtgtgccgctctccgtgatt
caaacctttgtgatgatggtcggagagttgaactaccagaacaacttcctggatgcttac
ttgaacaacgagcttccatttggtgtcttgacgtatgtcattttcgtgaactttgttctg
ctcatgccaatcctcttggtgaacctgatgatcggtttagcagtcggagacatcgctgaa
gttcaaagaaacgcttccctgaaacgaatagcgatgcagattgatctccacacatccctc
gaagacaagctcccttactggtttatgaagcgagtggacaaaccctcagtcaccatctac
cccaatcgcaagtgctccaggcacttcctaaaacaaatgatctctggggaggacgaaaga
agcgaagtctggactcgtctgcagtccaaatcgcagagctgcacgtttgtggagaatgag
ctcaaaaagcagaaggccaggatgaaggaaatgtcaggcatgttggagaagcagcactgc
ctgctcaagctcatcatccagaagatggaaatctcctctgaggccgaggagtccgacggt
cccgtgacactgaaaggcagcatgtggcccagcttgggtcatagcaaagcaaggggccgc
agcacgtcacgctgggtcccgctgattaaggccatcgaggccaaccgcaaatag
DBGET
integrated database retrieval system
