Poecilia latipinna (sailfin molly): 106959307
Help
Entry
106959307 CDS
T08005
Symbol
pdzrn4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plai04121
]
106959307 (pdzrn4)
Enzymes [BR:
plai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106959307 (pdzrn4)
Ubiquitin system [BR:
plai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
106959307 (pdzrn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ_6
PDZ
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
106959307
NCBI-ProteinID:
XP_014907282
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
FLRSFVQVEPNSIAARDGRIKEGDRILQINGFEVQDREKAVALLSSEEAKSIRLLVTRPE
IQLEEEAVWLDDEQQRLVEELKMEILEEKRKQREQSFEMADKLQGDEDVTTDTATCSSNN
QDSGFGRSTDSTEHQPLLARLYRRSPAQCLRDRWQSEHPHNRRGTVVPQHAQSTKTHSTS
QGNESVVSIRNSGCGVRGLENCFQQLLELKCQIRNGGECGVYSIRHSIECSLTGQGGGDG
DSEGDVGAGGGVEQELKMLNEELRSIELECQSIMQAHQLRKSQQLEQSQSAPCSPGTNQK
TGQKRHGRLADIHEYPERSDSDRVREKDSSSAYNTAESARSTPLGMERSPDHSLQRQISI
TNQKNLRLASSASSNPIPIPKPQGTHRPCRPADQGPVISSSPDQSNPSRSESDPALPADD
ERCDKKGRSRDSRRALPYGASYQTGTYHGQGGSKQLQSYMQLLQQHSSLEYSQSQLSLLS
VCRDPMHRNGRAGEPRLEWKVKVRADGTRYVARRPARDRILRERALRIREERSGGMTTDD
DAMSEMKMGRYWSKEERKQHLARAREQRKRREFMQKSRLDCLKEGPASGAEGKKEINILE
LSHKKMMKKRNKKILDNWMTIQELMSHGARVPEGSTVHNAFLSVTTV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
tttctgcgttcttttgtgcaggtggagccgaacagcatagcagcgagagacggacgcatt
aaggaaggagaccgcattctgcagataaatggctttgaagtgcaagaccgggagaaagcc
gtcgccttgttgtcaagcgaagaagcaaagagcatcagactcctggtgacaaggccagag
atccagctggaagaggaggctgtgtggctggatgacgagcagcagcggcttgttgaggag
ctgaagatggagattctggaggagaagaggaagcagagggaacagagctttgagatggca
gataagcttcaaggcgatgaggacgtcacaacagacacggccacctgttcttccaacaat
caggacagtggatttgggcgcagcacagacagtaccgagcaccagcccttgttggcaaga
ctttacaggaggagcccagcgcagtgcctgagggatcgatggcagtcagaacatccacac
aacaggcgagggaccgttgtaccacaacacgctcaaagcacaaaaacccattcaacgagc
caaggcaacgaaagcgtagtgagtattcgtaacagtggttgcggagtccgaggcttagag
aactgcttccagcaacttttagaactcaagtgccaaatacgaaacgggggcgaatgtggg
gtgtactccattagacacagcatagaatgtagtctcactgggcaaggtggaggggatgga
gatagtgaaggtgatgttggtgcagggggaggggtagagcaggagttgaagatgctgaac
gaagagctgcgcagcattgagttggagtgccagagcatcatgcaagcccatcagctacgc
aagtcccagcagcttgagcaatcacagtctgcaccctgctcaccaggaacgaaccagaaa
actggacaaaagcggcatgggaggctggcggacattcatgagtaccccgagaggtccgac
agcgacagagttcgcgagaaggacagctccagtgcctacaacacagcggagagtgcccgg
tcaacgcctcttggcatggagagatcccctgatcattctctgcagagacagatcagcatt
accaaccagaaaaacctcaggcttgcctcttctgcatcatccaatcccattcctatcccc
aagcctcaaggaacacataggccgtgcaggccagccgatcaaggtccagtcatctccagc
agccccgaccagagcaatccgtcacggtctgagtcggacccagctctaccggcggacgat
gaaagatgcgacaaaaagggaaggagcagagactcgagaagagctcttccttatggcgct
tcatatcagacgggcacctaccacggccagggaggatccaagcaacttcagagctatatg
cagctgctccagcagcactcgtccctggagtactcacagagccagctgagtctcctcagc
gtgtgtcgagatcccatgcaccgcaacggtcgtgcgggggagcctcgcctggagtggaaa
gtcaaagtccgcgcagatgggacacgctatgtcgccaggagacccgctcgcgaccgcata
cttagggagcgggcgctcagaatcagagaagagaggagcggaggcatgaccacagatgac
gacgcgatgagtgagatgaagatgggccgctactggagcaaagaggagaggaagcagcat
ttggcaagagccagagagcaaaggaagaggagggagttcatgcagaaaagccgtctcgat
tgcctaaaggaaggaccggcgagcggggccgagggcaaaaaggagatcaacatcttggag
ctcagtcacaaaaagatgatgaagaagcggaacaaaaagattctggacaactggatgacc
atccaagagctgatgagccatggagcgagggtcccagaggggtctactgttcataatgcc
tttctttctgtcaccactgtttaa
DBGET
integrated database retrieval system
