Poecilia latipinna (sailfin molly): 106959528
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Entry
106959528 CDS
T08005
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
106959528 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plai03021
]
106959528 (smarcd1)
03036 Chromosome and associated proteins [BR:
plai03036
]
106959528 (smarcd1)
Transcription machinery [BR:
plai03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
106959528 (smarcd1)
Chromosome and associated proteins [BR:
plai03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
106959528 (smarcd1)
PBAF complex
106959528 (smarcd1)
GBAF(ncBAF) complex
106959528 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
106959528
NCBI-ProteinID:
XP_014907633
Ensembl:
ENSPLAG00000017352
UniProt:
A0A3B3UK96
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAARGGFQSTPTAGGGGAMGPGPPVPGAAPGMGPGTPSGRMGPTSGAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGSSPVSRPGMPGVMDPSRKRPAPQQIQQVQQQQNRN
QHTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPR
LARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDFKTITDVVGNPEEERRAE
FYYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggtttcagtcaacaccgactgctggtggcggtggagcaatggga
cctgggccacctgtaccaggcgcagcgccaggtatgggacctgggactccctctggaaga
atgggaccgacttcaggcgcacagaaccacatgtaccgctctccgatgcccgggcctggg
tacccgaggccgggcatgcccccatccagccgtatgaccccgcagggccccgccatgggc
ccaccgggttacggcagcagccccgtgtctcgccccgggatgcccggcgtgatggacccg
tcccggaaaagacccgctcctcagcagattcagcaggttcagcaacagcagaaccgcaac
cagcacacaaagaagaagaagatggctgataaaattctacctcagaggatcagagagctg
gtcccagagtctcaggcttacatggatcttctggcttttgagaggaagctggatcagacc
atcatgcgcaaacggctcgacattcaggaggccctaaaaaggcctataaagcaaaagaga
aagcttcggatttttatatcaaacaccttcaatcctgcgaagcctgatgctgaggatgga
gaaggcacagttgcatcatgggagctgcgtgttgaagggcgactattagaagatactgct
gtgtccaagtatgaagctaccaaacaaaaaagaaagttctcctccttctttaagtcactt
gtgatcgaattggataaagacctgtatggaccagataatcaccttgtggaatggcacagg
acggccactacccaggagacggatggtttccaggtgaagaggcctggtgatgtgggagtt
cgctgcaccgtcctgctcatgctggattaccagcccccccagttcaagctggacccccga
ctggcccgcatgttgggtatccacactcagaccaggcctgtcatcatccaggctttgtgg
cagtacgtcaaaacacacaaactccaagatcctcatgagcgcgagttcatcaactgtgac
aaatacctccagcaaatttttgaaactcagcgaatgaagttttccgaaatcccacagcgc
ctgcatgctctgctgatgcctccagaaccaatcatcatcaaccatgtgatcagtgtggat
cccaatgatcaaaagaagactgcttgctatgacattgatgtggaggtggatgacacgctg
aagacccagatgaactcattcctgctctccacagccagtcagcaggaaatagcaggattg
gataacaagatccatgaaactattgagaccatcaaccagctgaaaacccagagggagttc
atgttgagttttgccagggatcctcagggctttatcaacgactggcttcagtcccagtgc
agggacttcaagaccattacagatgttgtgggaaacccagaagaggagcggagagcagag
ttttactatcagccgtgggctcaggaggcggtgtgtcgctacttctactccaaggtccag
cagaggcggcaggagctggaacaggcgcttggaatcaggaacacttga
DBGET
integrated database retrieval system
