Poecilia latipinna (sailfin molly): 106959546
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Entry
106959546 CDS
T08005
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106959546 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plai04131
]
106959546 (vps8)
Membrane trafficking [BR:
plai04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106959546 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_Vps41
Clathrin
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-RING_UBOX
zf-RING_11
Beta-prop_WDR5
zf-RING_5
Beta-prop_EML_2
zf-RING_2
ANAPC4_WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WDR55
zf-C3HC4
Beta-prop_HPS5
EIF3I
zf-rbx1
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
106959546
NCBI-ProteinID:
XP_014907669
Ensembl:
ENSPLAG00000000377
LinkDB
All DBs
Position
Unknown
AA seq
1639 aa
AA seq
DB search
MSQSPDSRSLLSASSQLNLMEVESIDDKEFDIPQVDTPPTLESILSQMEEEEDPFVLEDT
CLLNTDNMDAQSYDTSSLASSDSGDPAHLKRKRRTLDQNAAVHGSVLRLSLLKGISAQIV
AAADKVDAGLPTAIAMSGVIAVGTSHGLALVFDTNQALRLCLGNKTTGAEFGAVSALSIN
HDCSRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAILHVKFTDDPTLAVCNDSGGSV
FELTFRRVMGMRSCDSRCLFSGSKGEVCCIEPLRTPPDFRDHPITCYSLLAMASLTKILI
IGLKPSLNVWMTLPYTKSDPSSVPQLAWQFVPVQKTVNPMLAFCKGDSVHFLLVKKEETG
TIHVIKQRQLQLSCDIINLNWINSCSLVLLDSHEKLHVVDRPTQDVLETLDLEQVQLVYN
SRHFKSLATGGNVSQALALVGEKACYQSLSSYAGQIVCLGTKSAHIMSLRNWKERLDCLL
KQEHFTEALSLAWSFHEGTAKAVVGLHGDSQRRKAVISDKMVEILLHFTEYAVKKCPEQG
KLQVMEQHFQEMVPVLVDYCLLLQKADLLFNQLYSRLVENMVAKGVFLESLESYIVANRL
GHITTPVMKDLLAHYHDNGMMDSLERCIVHLDVTSLDIQQVVQVCWNNQLYDAVIYIFNR
GMNDYITPMEKLFSVIGPRVREGQSLTGDDVVMGNKLLVYISCCLAGRAYPIGDIPEDLV
VQVKYQVFEFLIRLHSGDSSQKEEVFPFIHTLLHFDTREFLNVLAMTFDDVQNDKQALEY
QQRTVDILLQVMVDNPDFTPSQVGGLFTFLARQLAKPNNTLFVNRNLFDQVLEFLCCPDD
DSRHTERQQVLLELLQVGGVVQFNEERLFTLAEKAKFYQICEFLYEQKHLYDRIVDCYLQ
DPLRKAEIFSYIHNLMSMPGYSSEEKLKVKEKVLQHMQELASLDPGKLADLVVWHFTEEV
QTIISELQDDSLLFQFLRCLLESQEGSQSVSRLPLESELYELLLDLMCRFEPQELLKFLH
TSQHYRLEEAIQITEKYHCNEAKAYLLEKKGDIPGAFAGLLQTLKERLDVLAAEMSGGIG
GGVDGQDEEEADGEFTLTTVKSSLNQMILFCHRNCQNLDQEQRKDLWFPLLDTMMASQKE
VMGLSDKHISNGLKEMTLKVLNCMSSFISLPAIIQHILQVSICHLSVMIDYGLFQKASLC
VSLQDDSLLFQFLRCLLESQEGSQSVSRLPLESELYELLLDLMCRFEPQELLKFLHTSQH
YRLEEAIQITEKYHCNEAKAYLLEKKGDIPGAFAGLLQTLKERLDVLAAEMSGGIGGGVD
GQDEEEADGEFTLTTVKSSLNQMILFCHRNCQNLDQEQRKDLWFPLLDTMMASQKEVMGL
SDKHISNGLKEMTLKVLNCMSSFISLPAIIQHILQDPVYGRGKLAEIQGLILGMLDTFTY
EQTLLETTTNLLNYDLHWSLAHLRSAVTRGLHPRQDCCNICLQHYKRKQDTSEEIIVFSC
GHLYHLQCLQQKDCGWGVASEPQQPWRCYKCSSSHGGRGGACTEPNRSRSASLAQTRFSS
GHHEKGAETHRKKVVAVATLDVQQELSWDHLRGLYRGPSRLSILSEVSHGQSSEKTGFLL
PVQPESFHLKLAPPPLFEE
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtctccagacagcaggagccttttatccgcttcttcccagctcaacctgatg
gaagtagagtcgattgacgataaggagtttgacattccccaagtggacaccccccccaca
ctggagagcatcctcagtcagatggaggaggaggaggaccctttcgttctggaggacacc
tgccttttaaacacggacaacatggacgctcagtcctacgacacgtcctccttggccagc
tctgacagcggagacccagcacacctcaaacgaaagagaaggactctggatcagaacgca
gcagttcacggctcggttcttcgcctcagcctgctaaagggcatctccgctcagatagtt
gctgctgctgacaaagtggatgctgggctgcccactgcaatagccatgtctggtgttatt
gccgtaggaacatctcatggtcttgccctggtgtttgacaccaaccaggctctgcggctc
tgtctgggcaacaagacaaccggagcggagttcggcgccgtttcggctcttagcatcaac
cacgactgctcacgtctgctatgtggctttgccaagggtcagattacaatgtgggatctc
gccaacggaaagcttttgaggaccatcactgatgcccatcctccagggacggccatactg
catgtgaagttcacagatgacccaactctggccgtgtgcaacgacagcggagggtctgtg
tttgagctgaccttcaggagggtgatggggatgcgctcatgcgactcacgatgtctcttc
agcggctctaaaggagaggtgtgctgtatagaaccgctgcggactcctccagacttcaga
gaccaccccatcacatgctactctctcctagctatggcttccctgaccaagattctgatc
attggactcaagcccagcctgaatgtgtggatgactcttccctacactaagtctgatccc
agcagcgtgcctcagctggcctggcagtttgttcctgtccagaagacggtcaaccccatg
ctggccttttgtaaaggagactcagtccacttcctgctggtgaagaaggaggagacgggc
accatccatgtgatcaagcagaggcagctgcagctgagttgtgacatcatcaacctgaac
tggatcaacagttgcagcctggtgctgctggacagccatgagaagctgcacgtggtggac
cggcccacccaggacgtcctggagacgctggacctggagcaggtgcagctggtctacaac
agccgacacttcaagtccctagcaactggaggcaacgtctcccaggctctggcgctggtt
ggagaaaaggcctgctatcagtcactctcaagctatgcaggacagatcgtctgcctgggc
accaagtcagctcacattatgtccctaaggaactggaaagagcgtctggactgtttactg
aagcaggagcatttcactgaggctctgtctctggcctggtccttccatgaaggcaccgcc
aaggctgtggttggccttcatggagattcacagagaaggaaggcggttatcagcgacaag
atggtagagattcttctccattttacagagtacgctgtgaagaaatgcccagaacagggc
aagctgcaggtcatggagcagcatttccaggaaatggtaccagtcctggtggattattgc
ctcctgctgcagaaggctgacctgctgttcaaccaactgtactctcggctagtggagaat
atggttgctaagggcgtcttcctggagtcactggagtcgtacatcgtcgccaatcggctt
ggtcacatcactacgcctgttatgaaggatctcctggcacattaccatgacaacggtatg
atggacagcctggagagatgcattgtccatctggatgtcacaagtctggacatacagcag
gtggtccaggtgtgttggaacaaccagctctatgatgcagtgatctatattttcaaccga
ggcatgaatgactacattactccgatggagaaactcttttcagtgattggtcccagagtc
agagaggggcagagcctaacaggtgatgatgtggtgatggggaataaattactagtttac
ataagctgctgtcttgctggaagagcctatccgattggagacatccctgaagatctggtt
gttcaggtcaaataccaggtgtttgagttcctgatccgtctccattcaggcgactcctca
cagaaggaggaagtcttcccatttattcacacactcctccactttgacactcgggagttc
ctcaatgtccttgccatgacgtttgatgatgtccagaacgacaagcaggccctggagtac
caacagaggacagtggacatcttacttcaggtaatggtggacaaccctgacttcactccc
tcccaagtcggtggtctcttcaccttcctggctcgccagctggccaaaccaaataacaca
ctgtttgtgaacaggaacctttttgatcaggtgctggagttcctgtgttgccctgacgat
gactctcgacatactgaacggcagcaggttctgctggagctgctgcaggtcgggggggtg
gtccagttcaacgaagaacggctcttcacactggcagagaaagccaagttctaccagatc
tgtgagttcctttatgagcagaagcatctgtatgaccgcatcgtggactgctacttacag
gacccacttcgaaaggcggaaatcttcagctacatccacaacctaatgtccatgccgggc
tacagctccgaggagaagctgaaggtcaaggagaaggtgctgcagcacatgcaggagctg
gcaagcctggatcctggtaaattagctgacctggtggtgtggcacttcacagaggaggtg
cagaccatcatctctgagctgcaggacgacagtctacttttccagttcctccgctgcctc
ctggagtctcaagaaggatctcagtccgtgtcccggctgcctctggagtctgaactttat
gagcttctgctggacctgatgtgccgctttgaaccacaggagcttctgaagtttctccac
acctcccagcattacaggcttgaggaggccatacagataacggagaagtaccactgtaat
gaagccaaggcttatctgctggagaagaagggagatattcctggagcatttgctggattg
ctgcagaccctgaaggaaagactggatgtcctcgctgcagagatgagtggcggcattgga
ggaggagttgacggacaggacgaagaggaggcggatggtgaattcacactgacgacagtg
aagagttcactcaaccaaatgattctcttctgtcatcgaaactgtcagaaccttgatcaa
gaacaaaggaaggatctgtggtttccactcctggacaccatgatggcctctcagaaggaa
gtcatggggctcagcgataaacatatctcgaatgggctgaaggagatgaccctgaaggtt
ctcaactgtatgagcagctttatctcacttcctgccatcattcagcatatcctacaggtg
agtatctgtcatttgtcagtgatgatagattatggtttatttcagaaggcttctctgtgc
gtgtctctgcaggacgacagtctacttttccagttcctccgctgcctcctggagtctcaa
gaaggatctcagtccgtgtcccggctgcctctggagtctgaactttatgagcttctgctg
gacctgatgtgccgctttgaaccacaggagcttctgaagtttctccacacctcccagcat
tacaggcttgaggaggccatacagataacggagaagtaccactgtaatgaagccaaggct
tatctgctggagaagaagggagatattcctggagcatttgctggattgctgcagaccctg
aaggaaagactggatgtcctcgctgcagagatgagtggcggcattggaggaggagttgac
ggacaggacgaagaggaggcggatggtgaattcacactgacgacagtgaagagttcactc
aaccaaatgattctcttctgtcatcgaaactgtcagaaccttgatcaagaacaaaggaag
gatctgtggtttccactcctggacaccatgatggcctctcagaaggaagtcatggggctc
agcgataaacatatctcgaatgggctgaaggagatgaccctgaaggttctcaactgtatg
agcagctttatctcacttcctgccatcattcagcatatcctacaggatccagtttatgga
agaggaaagctggcggagatccagggactcattctgggcatgctggacacgttcacctat
gaacagactctgcttgaaacaacaacaaatctgctgaactacgacctccactggtccctg
gcacacctccgctccgccgtcaccagagggctccatccacgtcaggactgctgcaacatc
tgcctgcagcactacaagaggaagcaggacacttctgaggagatcattgtgttcagctgt
ggccacctataccacctgcagtgcctgcagcagaaggattgtgggtggggcgtggcctcg
gagccgcagcagccatggaggtgctacaaatgttcctccagccatggaggaaggggcggg
gcttgtactgagccaaacagaagccgcagcgcatctctcgcccagactcggttttcatca
ggacatcatgagaaaggagctgagactcacaggaagaaggtggttgctgtggcaacattg
gatgtgcagcaggaactctcctgggatcacttgcgagggttgtacagaggaccgtccagg
ctgtccatcctctctgaggtttcacacggccaaagcagtgagaaaacaggcttcctgctt
ccagtccagccagagagtttccacctgaagctcgctcctcctcctctgtttgaagagtag
DBGET
integrated database retrieval system
