Poecilia latipinna (sailfin molly): 106960520
Help
Entry
106960520 CDS
T08005
Name
(RefSeq) collagen alpha-1(XIV) chain-like isoform X1
KO
K08133
collagen type XIV alpha
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
plai00535
]
106960520
Proteoglycans [BR:
plai00535
]
Extracellular matrix (ECM) proteoglycans
Others
106960520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
VWA_2
Collagen
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Fn3_Dep-1_3rd
FN3_Tor_3rd
VWA_3
Motif
Other DBs
NCBI-GeneID:
106960520
NCBI-ProteinID:
XP_014909142
Ensembl:
ENSPLAG00000011907
LinkDB
All DBs
Position
Unknown
AA seq
1635 aa
AA seq
DB search
MLRMLLMGEVRWCCLAPLVLLVFVSCDPSKAQGQVPAPRRLRFKVHSSRRLLVSWRQPKG
DVDSYLFLYNSLPGGQQKEVIVSKSDPKVLITDYNPSKDYIISVIAIRGREQSRPLRGRF
KAKPAAGGDADKDDESEPQRLTDSDGPPDDANEISGADLFVCHTAAIADIVILVDGSWSI
GRINFKLVRMFLENLVNAFDIGIDKTRIGLAQYSGDPRIEWHLNTYSTKEAVIDAVKNLP
YKGGNTLTGLALNFVSDYCFKPESGSRVGVPKIGILITDGKSQDDVVPPAESLRKAGVEL
FAIGVKNADENELQSIASEPHHTHVYNVADFNIMSSIVEGLTKTVCEQVELQDKDIKQKF
TPEKMEMPLNLETSEVTAQSFRVSWSPAAGNVEMYRVVYHPAQGGEPQEAVVAGSETSVV
LQHLSSLTEYQLAVFAVYTDEASEALRGSETTLALPSVASLRLFDATHSTVKARWSHVDG
VSGYMLLYAPITDDGDLNNECCPQINVADGVTEVELVGLTPDTEYSVTVYAMYGEEASDP
KTNRETTLPLSPPRNLQFSDITHNSAHISWDSPPDGVKGYRIMWVMTDGLVTKEAKVGPM
NSYDLSDLASLMEYSVAIFALYNEGQSEPLTDGFTTTPVPGPLNLRSSDVNAGSFKVSWD
HSATDIALYRLSWAPFSGGDTKEVILSGSENRYTLAGLSPSTKYEVLLTAIFDDESESDT
VSVIETTLAITTTIHTTKTVTRQAVKNLHLSDETTQSLDASWELEDTDVESYRISYTDLS
ANQEEETISVGGDQKSALLQPLLPDTQYKVTVTPVYSDGQDGISASALGSTLPLLSPENL
RVSEESYNRFRVSWDLPQSPTEGYRILYRPIHVQSPVLETTVDEDVNSILLLNLLSGTDY
SVQVTAFYQAGPSEPQLINAKTLFLGVSGLSTYQVRPDSMCVQWQPLLHATSYRVSIQSV
LNGQRQELNLGGSASRHCFYDLTPSSQYQISIYTQMQEMEGPSVSITDMTFSEPTPVPTE
PPSTEPTPTIPPAKEVCKEAKADLAFLVDGSWSIGDDNFMKITRFLYSTMGSLDLIGPDG
TQVAVAQFSDDARTEFLLSSHGNKEALLEAIQKIRYKGGNTKTGRAIKHVKESIFTPEAG
ARRGVPKVLVVLTDGRSQDDVNKVSKEMQMEGYIIFAIGFADADYGELVNIASKPSERHV
FFVDDLDAVKKIEEQLITFVCEAATATCPSMLMSGNTLAGFKMMEKFGLVEKEYSTLPGV
SLEPGSFNSFPCYRLHRDALVSQPTKYLHPEGLPSDYTISMMLRLLPETPQEPFALWEIL
NKDNAPMVGLILDSSGKTLTFFNHDYRGDFQTVTFEGPEIKKVFHGSFHKLHVTVSKTSV
KVVLDCSVVGEKSIRAAGNITTDGVEVLGKMVRSRAKRDGSAPFQLQMFDIICSTSWASR
DKCCELPALRVEEQCPPLPHACTCSQESKGPPGPSGPRSGFQLFLYEGGPGIRGARGNRG
EPGVTGPQGPMGEIGPSGPPGPPGPQGPSGLSIQGPPGIRGEKGERGDAGTGGPTGVPGS
PGSPGRDGPPGARGQPGNSGPQGRQGPPGPIGAPGAPGVPGPSGPAGPSGEQGVPGLAGT
KGDKGERVSYSICTR
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggatgttgttgatgggagaggtcaggtggtgctgtctggccccgctggtttta
cttgtctttgtttcctgtgaccccagtaaggctcagggtcaagttccagctccgaggagg
ctccgtttcaaagtgcacagttcccgcagactcctagtttcatggaggcagcccaaagga
gatgtcgacagctatttatttctctacaacagcttaccaggtggtcagcaaaaggaggtc
attgtgtctaaatctgacccaaaggttttaataacggactacaacccgtctaaggactac
attattagcgtcattgctattagaggcagagagcagagcagaccacttcgggggagattt
aaagctaaaccagctgctggaggtgatgctgacaaagacgacgagtccgagccgcagaga
ctgactgattcagatggacctcctgacgatgccaacgagatttctggagcagatctgttt
gtgtgccacaccgccgccattgcagatatcgtgatcctggtagacggctcatggagtatt
ggccggatcaacttcaagctggtccgtatgtttttggaaaacctggtcaatgcttttgac
attggcattgataagaccaggataggcctggcccagtacagcggagatcccaggatagaa
tggcatctgaatacttactctacgaaagaagctgtcattgatgcagtgaagaacttaccg
tataaaggaggaaacactctcacagggcttgcattgaattttgtctcagactactgtttc
aagcccgaatctggctcacgagtcggtgtaccaaagatagggattctcatcacagatgga
aaatcccaggacgacgttgtacccccagcagagagcctgcgaaaagctggcgttgagctg
tttgctattggtgtaaagaatgctgatgagaacgagctgcagtccatcgcctcagagccg
catcacactcacgtctacaatgtagctgacttcaacattatgagttcgatagtcgaggga
ctgacaaagacggtgtgtgaacaagtggagctgcaagacaaagacatcaagcagaaattt
acaccagagaaaatggaaatgccgctcaacctggaaacctcagaggtcacagcgcagagc
tttcgggtctcatggagtccagcagccggaaacgtggagatgtacagagtggtttaccac
ccggctcagggaggagaacctcaggaggctgtcgtggctggcagtgagacttcagtggtg
ttacagcatctcagctctctcactgagtaccagctcgccgtgtttgctgtgtacacggac
gaggcaagtgaagctctgagaggatcagaaactaccttggctctcccgtcagtcgccagc
ctccggctgttcgatgcgactcacagcacagtgaaggccaggtggagccatgtggatgga
gtctcaggctacatgctgctgtatgctcctattacagatgatggagatctaaacaacgag
tgttgtcctcagattaatgtagctgatggcgtaacagaggtggagctggttggcttgacg
cctgacactgaatactccgtcactgtttatgctatgtatggagaagaagcaagtgacccc
aaaacaaatcgggaaacaacactacctctgagccctcccaggaacctccagttttcagac
atcactcataactctgcccacatcagctgggactcaccgcctgatggggtgaaaggttac
cgcatcatgtgggtcatgacagacggactggtcacaaaggaggcgaaggtgggcccaatg
aattcgtatgacctcagtgacctggcgtccctcatggagtattcagtggccatctttgct
ttgtacaatgagggccagtcagagccactgactgacggcttcacaaccactccggttcct
ggtccgctgaatctgcgctccagtgacgtcaacgctggcagctttaaagtcagctgggat
cactcggccacagacattgctctctacagactctcctgggcaccattctctggtggtgac
acaaaggaggtgattctgagtggaagtgagaacagatacactctcgccggtctcagtccc
tccactaagtatgaagtcctgttaacggccatatttgacgatgaatctgagagcgacacg
gtctccgtcatagaaaccacattggctataacaacaacgattcataccacaaaaacagtg
acacgtcaggctgtgaaaaaccttcacctgagcgatgagaccacccaaagcttagacgca
tcctgggagctggaagacactgatgtggagagctacaggatttcctacactgacctcagt
gcaaaccaagaggaggaaactatatccgttggtggtgatcagaaaagtgcattgctgcag
cctttactaccagacacgcagtacaaagtgacggtcacacctgtgtactctgatggacaa
gatggcatcagtgcttctgctttgggttctacattgcctctcttgtctcctgaaaatcta
cgtgtgtcagaggagtcgtacaaccgtttcagggtctcctgggatctgcctcagtctccg
acagaaggttacaggattctctaccggcccattcatgttcaaagtccagttttggagacg
acagtagacgaagatgtgaactcaattctactcctgaatcttttaagcgggacggattac
agtgtccaagtgacggctttctaccaagcaggaccgagtgaaccacagctcattaatgcg
aagacattgttccttggtgtttctggcttgtcaacctaccaggtgcgccccgacagcatg
tgtgttcagtggcagcctcttctgcacgccacatcataccgtgtctccatacagtctgtg
ctcaatggtcagagacaagagctaaacctgggaggttcagcttcgcgccactgtttctat
gacctcactcccagtagccagtaccagatcagcatttatacacaaatgcaagaaatggaa
ggaccgtctgtatccattactgacatgacattttcagagcccactcctgttccgactgaa
cctcccagcacagagcccactcccaccatcccgcctgctaaagaagtgtgcaaggaagcc
aaggctgatctggcgtttttggttgacggctcttggtccattggagacgacaacttcatg
aagatcacacgttttctctacagcactatgggttcactggatctgattggaccagatggc
acccaggtggctgtcgctcagttcagcgacgacgcacggactgaatttctgctgagttcc
cacggtaacaaggaagcgctgctggaagccattcagaagatcagatacaagggcgggaac
accaagacaggtcgagccatcaagcacgtgaaggaatccatcttcacgccagaggccgga
gccaggaggggcgttcccaaggtcctggttgttctgactgatggacggtcgcaggacgat
gtcaacaaagtgtcaaaggagatgcaaatggagggctacatcatctttgcaatcggcttt
gcggatgcagactatggagagctggtgaatattgccagcaagcccagcgagagacacgtc
tttttcgtggatgatctggatgctgtgaagaaaatagaggagcaacttattaccttcgtc
tgtgaggcagccaccgccacttgtccatctatgctgatgagcggcaacacgctggcaggc
ttcaaaatgatggagaagtttggcctggtggagaaggagtacagcaccctgcctggagtt
tctctggagcctggttcgtttaacagcttcccctgctacaggttacaccgcgatgccctg
gtgtcgcagcccaccaagtaccttcaccctgagggtttgccatccgactacaccatttct
atgatgctccgtttgctccctgagaccccgcaggaaccctttgctttgtgggaaatcctc
aacaaagacaatgcgccgatggtgggcctaatcctcgacagctctgggaagacgctgaca
ttcttcaaccacgactacagaggagacttccagactgttacgtttgaaggaccagaaatc
aaaaaggttttccacggcagcttccacaagctccatgtaaccgtcagcaagacgtcggtg
aaggtggtgttggactgctctgtggtcggggagaagtccatcagagcggctgggaatatc
accacagacggagtcgaggtcctggggaaaatggttcggtccagagccaaaagagacggc
tctgctccgtttcagctgcagatgtttgacatcatctgcagcacatcctgggccagcaga
gataagtgctgtgagctgccagctttgagagtggaggagcagtgtcctcccctgccccat
gcctgcacctgttctcaggaaagcaaaggacctccaggaccatccgggccccgttctgga
ttccaattgtttctttacgagggtggacccgggataaggggagccagaggaaacagaggg
gaaccaggagtgacgggaccccagggacctatgggggaaatcggcccgtctgggcctcca
ggaccgcctggtcctcagggacccagtggactctccattcagggacccccaggcattcgt
ggagaaaagggagagagaggtgatgctggcacaggaggaccaacgggcgttcctggaagc
cctggctctccaggcagagatggtcctccgggagcaaggggtcagccgggtaacagcggt
cctcagggaagacaaggacctcctggacccatcggagctccaggagctcctggagtccca
gggcccagtggaccagcgggaccttcaggtgaacaaggagtgcctggtcttgctggtacc
aaaggcgataaaggagagagagtaagctactcaatctgtacacgttag
DBGET
integrated database retrieval system
