Poecilia latipinna (sailfin molly): 106960667
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Entry
106960667 CDS
T08005
Symbol
ptbp1
Name
(RefSeq) polypyrimidine tract-binding protein 1 isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plai03019
]
106960667 (ptbp1)
03041 Spliceosome [BR:
plai03041
]
106960667 (ptbp1)
Messenger RNA biogenesis [BR:
plai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
106960667 (ptbp1)
Spliceosome [BR:
plai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106960667 (ptbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
106960667
NCBI-ProteinID:
XP_014909364
Ensembl:
ENSPLAG00000007940
UniProt:
A0A3B3VD96
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MDGRLDATELYPLGSGYVPEIDSVHDISVGTKRGSDELFSSCISNGPYIMNSANGNDSKK
FKGDVRSPGVPSRVVHVRKLPNDINEAEVISLGLPFGKVTNLLMLKGKNQAFLELNSEEC
AQTMVSYYSSVTPVIRNHPIYMQYSTHKELKTDNSPNQVRAQAALQAVNALHGGGMGSMA
IPTDPSSLAGATAQSPVLRVIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALI
QYADAMTAQHAKLSLDGQNIYNACCTLRISFSKLTSLNVKYNNDKSRDYTRPDLPTADSQ
PSLDHQTMAAAAFTAPGIISASPFGGAHAFPPTFAIQQAGLSVPGIPGALASLGMGHTGM
AAAAAAAASRLGLSGLNATGGHNVLLVSNLNPETVTPHCLFILFGVYGDVMRVKILFNKK
ENALVQMSDGTQAQLAMSHLNGQRLHGRAVRVTLSKHTMVQLPREGHEDQGLTKDFSNSP
LHRFKKPGSKNYSNIFPPSATLHLSNIPPSVMEDDLKRLFASSGATVKAFKFFQKDRKMA
LIQMGSVEEAIECLIEFHNHDLGENHHLRVSFSKSTI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggacggccgcctagacgccactgagttgtaccctctgggatccggctacgtccctgaa
attgacagtgtccatgacatatcagttggcacaaagaggggatccgacgaactcttttct
tcctgcatatccaacggaccctatatcatgaactcagccaatggcaacgacagcaaaaaa
ttcaaaggtgatgtccgcagtcctggtgtcccatcacgtgtggtccacgtacgcaagctg
cccaatgacatcaatgaggccgaggttataagcctgggactgccctttgggaaggtcact
aatttgctgatgttgaaagggaaaaaccaggcctttctggagcttaacagtgaagagtgt
gcacagacgatggtgagctactactcttctgtcacccccgtcatcagaaaccaccccatc
tacatgcaatactcgactcataaggagctcaagacggacaactctcccaaccaagtgcgt
gcccaggcagctctgcaggcagtcaatgccctgcatggcggtggaatgggaagcatggcc
atccccacagatccaagcagcctggctggagccacagcccagagccctgtgctcagagtg
attgtggaaaaccttttctaccccgtaaccctggatgtcctgcatcagattttttcaaag
tttggaaccgtgctgaagatcatcactttcaccaagaataaccagttccaggcgttgatc
cagtatgctgatgccatgacagctcagcatgctaaactgtctctagatggccagaacatc
tacaacgcttgctgtaccctgagaatcagcttctccaagctcactagcctcaacgttaag
tacaacaacgacaaaagcagggactacacccgccctgaccttcctacggcagattcccag
ccctcacttgaccaccagaccatggcagctgcagcatttactgctccaggtataatctca
gcctcgccgtttggtggagcgcatgccttccccccaacatttgccatccagcaagctgga
ctgtcagtgcctggcattcccggtgccttggcgtccctgggcatgggtcacactggcatg
gcggctgctgcggcggccgcagccagccggcttggcctatcaggtctcaatgccactggg
ggacacaacgtgttactggtcagcaacctgaaccctgagaccgttacgccacactgcctc
tttattcttttcggtgtgtacggtgatgtcatgagagtgaagatcttgtttaataaaaag
gagaacgctctagtccagatgtctgatggcacacaggctcagctagccatgagccacctg
aatggccagcgtctccatggcagggccgtgcgcgtgacgttgtcgaagcacacgatggtt
cagctgcccagagaaggccatgaggaccagggcctcacaaaggatttcagcaactcgccg
cttcaccgcttcaagaagcccggctccaaaaattactccaacatcttcccaccgtctgca
acactccatctctccaacataccgccttctgtgatggaggatgatctcaaaagactcttt
gcaagctcaggagccacagtcaaggcctttaagttctttcaaaaggaccgcaagatggcc
ctgatccagatgggctcagtcgaagaggcgatcgagtgcctcatcgagttccacaaccat
gatctgggagagaaccatcacctccgagtgtccttctcaaaatccaccatctga
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