Poecilia latipinna (sailfin molly): 106960691
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Entry
106960691 CDS
T08005
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04140
Autophagy - animal
plai04142
Lysosome biogenesis
plai04145
Phagocytosis
plai04148
Efferocytosis
plai05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
106960691 (vps18)
04142 Lysosome biogenesis
106960691 (vps18)
04140 Autophagy - animal
106960691 (vps18)
04148 Efferocytosis
106960691 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106960691 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plai04131
]
106960691 (vps18)
Membrane trafficking [BR:
plai04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
106960691 (vps18)
Hops complex
106960691 (vps18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-RING_5
zf-RING_Vps41
zf-RING_16
aq_1631
RBSN_mid
zf_RING_Vps8
zf-RING_2
zf-C3HC4_2
zf-C3H2C3
zf-ANAPC11
zf-RING_UBOX
zf-RING_11
DUF5600
zf-rbx1
DUF4446
DUF1664
LETM1_C
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
106960691
NCBI-ProteinID:
XP_014909400
Ensembl:
ENSPLAG00000006731
LinkDB
All DBs
Position
Unknown
AA seq
982 aa
AA seq
DB search
MASILDEYEDSQNIRQSSQQHSRLSSANIGLTHSGFVNVRLEEEKPIFNKQRIDFTPPER
INHLAVCNNQLCMSLGKDTLLRIDLAKPDQLNQTELGRKDDSKVYKLFLDPTGFHLLISL
NTSECLYLNRNTQKVRSLSRWRGHLIESVGWNKLLGNETSTGPILVGTSQGIIFEAEISA
NEGSLFNTNPDQYFRQVHSLEEDGKPAPVCCLEIERSPENKYFIIATTRKRLFQFVGKVA
EGSEQQGLSTIFSQNQDLLPSFQEFPANMGYSEITFYTAKLRNFPKAFAWMMGNGVLYGQ
LDYVRPDSLLSDVQVWEYTPDIDISQNKPISIVLTQFHFLLLLHDRIKAICTLNGQVVYE
DVFPDKFGPLKRMIKDPIGGLVWIYTERAVFRYHIQRESRDVWQMYMNMNKFDLAKEYCR
DRPECMDMVLAKEAEYCFQNKRYLESAKCYALTQNYFEEIALKFIEAKQEEALKEFLLKK
LNNLKQSERTQITLLVTWLTELYLNRLGQLESDDNSLIFQETRDEFRQFLSSSKHRDCLF
NNRGTIYDLLASHGNVDDMVYFSVVMQDYERVISHYCQHDNFSAALDVLAKHCDEKLFYK
FSPVLMQHIPKNVVNAWIQMGKRLDPKKLIPALMNYSQMGSTQQINETIRYMEFCVYELN
VTEEAIHNYLLSLYAKYKPDSLLQYLRQAGTHPSEIHYDLKYALRLCAEHGFLQACVLVY
RIMELHEEAVDLALQVDVDLAKSCADLPEDDEEMRKKLWLKIARHVVQEEKDVKKAMNCL
SSCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNKHIEELKQEMEEATESAKRIREDI
QEMRNKYGVVDSQEKCAACDFPLLNRPFYLFLCGHMFHNDCLFQEVTPHLSAFKQNRLEE
LQKKLAATTQSSKSRHRPTQKEEGDTASLGKGIGATSREQIVSDIDDIVASECVYCGELM
IKSIDKPFIDPQKFEQDKSSWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcttctattcttgatgagtatgaggactctcaaaacatcaggcaaagttctcagcaa
cacagccgcctgagctctgccaacatcgggctaacacattcaggctttgtgaatgtcaga
ctggaggaagaaaagccaatattcaacaaacagaggattgactttactccacctgagagg
ataaatcacttggcagtctgcaacaaccagctctgcatgagtctgggaaaagacacgttg
ttgaggattgacttggcaaaaccagatcaactcaatcaaaccgaattaggaaggaaagac
gacagcaaagtgtacaagctgttcctggacccgacaggcttccatctgttgatcagcctg
aataccagcgagtgtctgtacctcaacaggaacacccagaaggtgcgcagtctgtcccgc
tggagaggccacctcatcgagagtgtgggctggaacaagctgctgggcaacgagaccagc
acagggcccatcctggttggcaccagtcaggggatcatctttgaagcggagatctctgcg
aacgagggcagcctgttcaataccaacccggatcagtacttcagacaggttcactccctg
gaagaggatggcaagcctgcaccagtctgctgcttggaaatagagcgaagcccagaaaac
aagtacttcatcatcgccaccacccgcaagcgcctgttccagtttgtgggtaaggtggcc
gaagggtcggagcagcaaggtctcagcaccatcttcagtcagaaccaggacctgctgccc
agtttccaggagttcccagccaacatgggatacagtgagattaccttctacacagcaaaa
cttaggaacttccccaaagcgtttgcctggatgatgggtaatggcgttctctatggccag
ctggactacgtccggcccgattccctgctgagtgacgtccaggtatgggaatacacaccg
gatattgacattagccagaacaaacccatctccattgtgctgacacagttccacttcctg
ctgctgcttcatgaccgaataaaggcgatctgcactctgaacggacaggtggtgtatgag
gacgtgttcccagataaatttggcccccttaagagaatgatcaaagatccaattggcggg
ttggtatggatctacacggagcgagcagtcttccgatatcacatccagcgcgagtctagg
gacgtctggcagatgtacatgaacatgaacaagtttgacctcgccaaggagtactgccgc
gaccggcccgagtgcatggacatggtgctggctaaggaggccgagtactgcttccagaac
aagagatacctggaaagcgccaagtgctacgcactcactcagaactacttcgaagagata
gcgctcaagttcatcgaagcgaaacaagaagaagcgttgaaggagttcttgctgaagaaa
ctgaacaatctgaaacaaagcgagagaacgcagatcaccttgctggtcacctggctgacc
gagctctacctgaaccgactcgggcagctggagagcgacgacaacagcctcatcttccag
gaaacccgagacgagttccgccagttcctgagcagctccaagcacagggactgcctgttc
aacaaccgcggcaccatttacgacctgctggccagccacggcaacgtggacgacatggtt
tacttctcggtcgtcatgcaggactacgagagggtcatatcccactactgccagcacgac
aacttcagtgcggccctggacgtgctcgccaagcactgcgacgaaaagctcttctacaag
ttctcgccggtcctcatgcagcacattcccaagaacgtggtgaatgcgtggatccagatg
ggcaagaggctggacccgaagaagctcatcccggctctgatgaactacagccagatgggc
agcacccagcagatcaacgagaccatccgctacatggagttctgtgtttacgagctgaat
gtcactgaggaagccattcataactacttgctgtcactttatgcaaagtacaagccagac
tctctattgcagtatctcagacaggcgggtactcacccctcagagatccactatgacctg
aagtatgcactcaggctgtgtgcggagcatggctttcttcaggcctgtgtgctggtttat
agaataatggaactgcacgaggaggcagtggatctggctttacaagttgacgtggacttg
gccaagtcctgcgcagatctgcccgaggacgacgaggagatgaggaaaaaactttggctg
aagatcgccaggcatgtggtgcaggaagagaaggatgtgaagaaagccatgaactgtctg
tccagctgcaacttgctcaagatcgaagacatcttgcctttctttccagattttgtcacc
attgaccactttaaggaggcaatctgcagctccctggaggagtacaacaagcacatcgag
gagctgaagcaggaaatggaggaagccacagagagtgctaaacgaatcagggaagacatc
caggaaatgaggaataagtacggcgttgtggactcccaagaaaagtgtgcagcatgtgac
ttcccgttactcaacaggcccttctatttgtttctgtgtggacacatgttccataacgac
tgcctgtttcaggaagtgacccctcacctctcagccttcaagcagaatcgcctggaagag
ctccagaagaaactggctgctacaacacagtcctctaaatctcgccaccgtcccactcaa
aaggaggaaggggacacggcgagtctgggaaagggcatcggggcaacgagccgtgagcag
atcgtatcggacatcgatgacatcgttgcatctgagtgcgtgtactgtggcgaactgatg
atcaaatccatcgacaagcctttcattgacccgcagaaatttgaacaggacaaatccagc
tggctgtga
DBGET
integrated database retrieval system
