Poecilia latipinna (sailfin molly): 106961157
Help
Entry
106961157 CDS
T08005
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
plai
Poecilia latipinna (sailfin molly)
Pathway
plai04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
106961157
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plai04515
]
106961157
Cell adhesion molecules [BR:
plai04515
]
Immunoglobulin superfamily
ROBO family
106961157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Unc5_NetrinR_N
Fn3_Dep-1_3rd
Ig_PDGFR_d4
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
106961157
NCBI-ProteinID:
XP_014910182
Ensembl:
ENSPLAG00000006255
LinkDB
All DBs
Position
Unknown
AA seq
1583 aa
AA seq
DB search
MLAAQLFFLISLLFVIQLEQSRGKDVSLEAEKRRGGNEVITSSPLLATEVDQDISFGYKG
SRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERVETDRDNPRSH
RMLLPSGSLFFLRIVHGRRSKPDDGSYVCVARNYLGQAISHNASLEVAILRDDFRQNPVD
VMVAVGEPAVLECQPPRGHPEPTISWRRDGANLDDRDERITIRSGKLMITNTRKSDAGKY
ICVATNMVGERESEIAVLTVLERPTFVKRPGNVVLLADESVEFHCVVQGDPVPTVRWRKD
DSDLPKGRFEILEDHTLIVRQVASPDEGSYTCMAENMVGKSEASATLTVHVDTVPPAFAV
RPRNQAVSVGRTVTFQCEATGNPQPAIFWQREGSESLLFSYQPPQPFSRLSVSQMGSLTI
TDVQRSDAGFYICQALNIAGSVITKALLEVTDAGSEHPPPVIRQGPANQTVPVDSTVVLG
CQTVGAAPSAVHWKKDGIVVSPVDSRMSLTETGSLKIHYAKLGDSGFYTCVASSPSGEAS
WTAYLQVEEFGVVVQSGHPKDSHLIPGAPSKPEVSDVSRTSVTLSWKSSPNPGVAPTSYL
IEAFSYTLGNRWVTLAEHVKTESHVLTNLKPGTVYLFMVRASNVYGLSDPSPISDSVRTQ
DSSSTMQGVDHRHIQRELGDVVIHLHTPTVLSSSAVRVHWMVEQQSPYIQGYKVLYRVSA
EHGQPESQWAVLEVRALPEDGVVISQLKKGCIYEFKVRPFFDEFQGADSEVKVVRTLEEA
PRRAPQGVTVTKSDANGTAILVSWKPPPEGGEDGIIQEYKIWCLGNESRYHVNQSVDGST
FSVLIPSLAPGIRYSVEVAASNGAGPGVKSDVAFFQLDSAGQMMDISDKRGTLSQISEVV
KQPAFIAGIGATCWLILMIFSVWLYRHRKKRSGLSSTYTGIRKVPSFTFTPTVAYQRGDT
VCGAGRPVPLSMGEPLNQLWLPDNWPNACANHKDCSINCCNNGNGTSDSNMTTYSRPADC
IANYGNHPENKQGGQLGSETPIYSDVNLSSKLTEIKTFNNSNFCYTSPGGDSSGTYEPIP
YATTQLIQANIKNKAAAAAGCAAEPPDIPCWKQPPNLPPIPKEMAALMQHSTAEQRCNDL
QGSEGMIHPKTMPYNQTRDHSTGGSHQSSDRGSSSSTSGSQNQRKGMRAQKIPKHNAMNW
GDAVSDPHPNAWDCDEYSLPMERSFDPEERLDSCPTPPVRGVASSTTEASCSGVPAAPPQ
GDLSNGLQDGAEHLAHTYCSILDTDGPEENEEEADEETEAALAEDLYSQSQHHLKHKQQP
HHVSPHKLLLQGLEQTPASSTGDLDRSVTGSMVNSWGSASEDNISSGRSSVVSTSEGSFF
TDGDFNQAVASSRDIVGLRMCRYPEVPGRRHQRASSPMSTDSNMSPAITHKRPRRHKPNQ
SGQQDYQSKDIFSDDSCMPLNFTNQMSHDDHKARGATLPRMGSGQGRARRGSAGTHRARD
VATEQRESQEMDKVPQGAKGNNNNRQHSEFGDVLLYSRPSFPSGQPQRESGCNPSNFQAC
GGSRSKQGEQAILTEQVEEFLKR
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgctggctgctcagctattctttctcatcagcctgctctttgtcatccagctggagcag
agccgagggaaggacgtctcattagaggctgaaaaacgtagaggaggcaatgaggtcatc
acctcatctccactattggcaacagaagtggatcaagacatcagcttcggatacaaaggg
tctcgtctccgacaggaagacttcccaccccggattgtagagcacccgtctgatttgatt
gtgtccaaaggggaaccagccacgctcaactgtaaggcagagggccgtccaaccccgaca
gtggaatggtacaaagatggcgagcgcgttgagacggaccgagacaacccgcgctcccac
cgcatgctgctgcccagcggatccctcttcttcctgcgcatcgtccacggacgtcggagc
aagccagacgacggcagctacgtctgtgtggcccgaaattatctgggccaggcgatcagt
cacaacgcatccctggaagtagctattttgcgggacgacttcaggcagaaccccgttgac
gtcatggttgccgttggagagcctgcggtgctggagtgccaacccccccgtggacacccc
gagcccacaatctcctggaggagagacggcgccaacttggacgacagagacgaacgcatc
acaatccggagcggcaagcttatgatcaccaacaccaggaagagcgacgcggggaagtac
atctgcgtggccactaacatggtgggggagagggagagtgagatcgcggtactcactgtg
ctagagcggccaaccttcgtgaagcgccccggcaacgtggtgctgctggcggacgagagc
gtggagttccactgcgttgttcaaggagaccccgtccccaccgtccgctggaggaaagat
gactctgacctacctaagggcagatttgaaatcctggaggaccacactctgattgttcgc
caagttgcctctccagatgagggctcctacacgtgtatggcagagaacatggtcgggaaa
tctgaagcatctgccaccctcaccgtacacgtcgacacggtgccccccgccttcgccgtt
cgccccaggaaccaggcggtgtcggtgggcaggacggtcaccttccagtgcgaagccacg
ggcaacccgcagccggccattttctggcagagggagggcagcgagagtcttctgttctcc
taccagccgccacagcccttcagccgtctgtccgtctcccaaatgggcagcttaaccatt
acggacgttcagcgctctgacgcgggcttctacatctgccaggctctcaacatagctggc
agtgtcattactaaagctctgctagaagttacagatgctggatcagagcacccccctccc
gtcatccgccagggtcccgccaatcagacggttcccgttgacagcacggtagtattgggt
tgccaaactgttggcgctgcgccttccgctgtccactggaagaaggacggcatagtggtc
tctccggtggattctcggatgtccctaacagaaacggggtcactgaagatccactatgca
aagctgggcgattcagggttctacacatgtgttgcttctagtccgagtggagaggcttcc
tggactgcgtatctgcaagtggaagagtttggcgttgttgtccagtctggtcatcccaaa
gattcccacctgattcctggtgctccgtctaaacctgaagtttctgatgttagccggacg
tctgtcacgctgtcatggaaatccagccctaatcctggcgtagcgcccacatcctactta
attgaagcattcagctatacgttaggaaacagatgggtgacattagcagagcatgtgaag
actgagtcccatgttctgactaatctgaaacctggaactgtttatctcttcatggtcaga
gccagtaatgtttatggccttagtgatcccagtccaatctctgactcagtcagaactcaa
gacagctcctccaccatgcagggggtggaccaccgtcacatccagagagaactgggagat
gttgtgatccacctacacacaccgacagtcctgtcatcttcagctgtccgggtccactgg
atggtggaacagcagtccccttacatccagggctacaaggtgctttacagggtatccgcg
gagcacgggcagccggaatcgcagtgggctgttctggaggtgcgtgccctgccggaggac
ggggtggtgatcagtcagctaaagaagggatgcatctacgagttcaaagtgcgacctttc
tttgatgagttccaaggagctgacagtgaggtgaaggttgtcaggacattggaagaagcc
ccgagaagagctccccagggtgttacagtcacgaagagcgatgccaatgggactgctatc
cttgtttcctggaagccacctccagaggggggagaggacggaatcattcaggaatacaag
atctggtgcctgggtaacgagagccgctaccacgtgaatcagtcggtggatgggtcaacc
ttctctgtgctcattcccagtctggctccaggaattcgctacagcgtagaagttgcagca
agcaacggtgccggcccaggagtcaagagcgatgtggcgttctttcaattagattctgcc
ggccagatgatggacatcagcgacaaaagaggcaccttgtcccagatctcagaggtggtg
aagcagccggcttttatcgcaggcattggcgccacctgctggctcatcctcatgattttc
agcgtgtggctgtaccgtcatcgcaagaagaggagtggcctcagcagcacatacaccggc
atccggaaggtcccatcttttacgtttacacctacagtggcatatcaaagaggagatact
gtgtgcggagctggcaggcctgtccctctcagcatgggcgagcctctgaaccagctgtgg
ctgccagacaactggccaaacgcatgtgccaatcataaggactgcagcatcaactgctgc
aataatggcaacggcaccagtgacagcaacatgacaacatacagccgaccagctgactgc
attgccaactatggaaaccacccagaaaacaagcaggggggacagcttggttctgagacc
cccatatacagcgacgtgaatctctccagcaaactcactgagattaagacgttcaacaac
tccaacttttgctacacgagcccgggaggcgactcgtcgggcacgtacgagcccataccg
tatgccaccacgcagctcatacaggccaacattaaaaacaaggctgccgccgccgccggc
tgtgcagccgagcccccggacataccctgctggaagcagccgcccaacctgccgccgata
cccaaagagatggcagcgctgatgcagcacagcacagccgagcagcgctgtaacgatctg
cagggaagcgagggcatgatccaccccaagacgatgccgtacaaccagacccgcgaccac
agcacaggaggctcccatcagagctccgacagaggcagcagcagcagcacctcagggagt
caaaatcaaaggaaaggaatgcgggcccagaagattcccaaacacaacgcgatgaactgg
ggggacgccgtgtccgatcctcatcccaacgcctgggactgcgacgagtacagtctgccc
atggagaggagctttgatccagaggagagactggacagctgccccactcccccggtcaga
ggagtagcctcatcaactactgaagcgtcctgcagcggcgtacccgccgctccaccgcag
ggagaccttagcaacggcctgcaggatggagccgaacacctcgcccacacctactgctca
atactggacacagatggaccggaggagaacgaggaggaagccgacgaggagacggaggcc
gcgctggcggaagatctctacagccaatcccagcaccacctgaagcacaagcagcagccg
caccacgtctctccgcacaaactgctcctgcaaggtctggagcagacgccggcctccagc
accggggatctggacagatcggtcacagggtctatggtcaacagctggggctcggcgtct
gaggataacatctcgtcaggcaggtccagcgtcgtgagcacatcggagggctctttcttc
acagacggcgatttcaaccaggctgtcgcttcttccagggatattgtaggcctgcgcatg
tgcaggtacccagaggtgccaggtcggcggcaccagcgagcaagcagccccatgtcgacg
gacagcaacatgagtcctgcgataacacacaaaaggcccagacgccataaaccaaaccag
tctggacaacaggactaccaatccaaagatatcttcagcgacgactcttgcatgcctcta
aatttcacgaaccagatgtcccacgacgaccacaaagcgaggggggcgactctgcctcgg
atgggctccgggcagggccgggccagacgaggcagcgccgggactcacagggccagagac
gtagcgaccgagcagagagagagtcaagaaatggacaaggttccacagggggctaaagga
aacaacaacaaccgacagcattcagaattcggggacgtgcttttgtacagtcgtccgtct
ttcccgtcaggccagcctcagagggagtcgggctgcaatccatcaaactttcaggcatgt
ggaggctcaaggtccaaacagggagagcaggccatcctcacagaacaggtggaagagttc
ctaaagaggtaa
DBGET
integrated database retrieval system
