Poecilia latipinna (sailfin molly): 106962760
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Entry
106962760 CDS
T08005
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plai03016
]
106962760 (trub1)
Enzymes [BR:
plai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
106962760 (trub1)
Transfer RNA biogenesis [BR:
plai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
106962760 (trub1)
Prokaryotic type
106962760 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
GAIN_A
Motif
Other DBs
NCBI-GeneID:
106962760
NCBI-ProteinID:
XP_014912857
Ensembl:
ENSPLAG00000013855
LinkDB
All DBs
Position
Unknown
AA seq
297 aa
AA seq
DB search
MNISQKTSMAGNVSGAAGPISSLSKLQSLNGLFAIYKKQGPTSADVLNKFKDTLLREAGV
QYPNSRKRKKQYLKLGHGGTLDSAASGVLVVGIGNGTKMLSTMLTGSKILFVCILIISLK
KYMAVGELGKATDTLDATGTVIMEKVFEHITRLDMEEKLKAFTGDIMQVPPLFSALKKDG
QRLSVLLKKGHQVEAKPARPVTVHSLTLQEFKPPLFTLDIECGGGFYVRSLVDDLGKALS
SCAHVKELVRTKQGQFTLQDHVLHEEQWTLQSVVGALQPCPEEDQRTDSPRSPQNAT
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctcacaaaaaacaagcatggctgggaatgtgagcggcgcagcgggaccaata
agttctctgtctaagcttcagtctttaaatggattgttcgccatatataagaaacaaggg
ccgacatctgctgatgtgttaaacaagttcaaagatacgttgctcagagaggcgggagtg
cagtacccaaacagcagaaagaggaagaagcagtatctgaagttaggccacggagggacc
ctggacagcgctgccagcggagtcttggttgtcggtattgggaacgggacaaaaatgctc
agcacgatgttgactggttcaaagattttgtttgtgtgtattctaattatatctttgaag
aaatacatggctgtgggagaactgggaaaagcaacagatactcttgatgccactggaacg
gtgattatggagaaagtgtttgagcacataaccaggctggacatggaggagaagttaaaa
gcttttactggggacattatgcaggttcctccactcttctccgccctgaagaaagacggc
cagcgtctgtctgtgttgttgaagaaaggtcaccaggtggaggccaaacctgcacggcct
gtcaccgtgcacagcctgacactgcaggagttcaaacctcctctcttcactctcgatatt
gaatgcggtggagggttttatgtcagaagcctggtggacgacctggggaaagctctgtcg
tcgtgtgctcatgtgaaggagttggtcaggacgaagcagggccagttcaccctgcaggat
cacgtgttgcatgaggagcagtggacactgcagagcgtcgttggggcgctgcagccctgc
ccagaggaggaccagaggacggactctcccagatccccacagaacgctacctaa
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