Poecilia latipinna (sailfin molly): 106963570
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Entry
106963570 CDS
T08005
Name
(RefSeq) vacuolar protein sorting-associated protein 13A-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
plai
Poecilia latipinna (sailfin molly)
Brite
KEGG Orthology (KO) [BR:
plai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plai04131
]
106963570
Membrane trafficking [BR:
plai04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106963570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
106963570
NCBI-ProteinID:
XP_014914047
Ensembl:
ENSPLAG00000019691
LinkDB
All DBs
Position
Unknown
AA seq
3181 aa
AA seq
DB search
IKYDAEKEEKQLQEARQRELDRIEETKLKAAEQENTKLEKQDTFVEKLVTQVIKNLQVKI
SNIHVRYEDDITNPNCPLSFGVSLKNLSLQTADNHWKPSLLDEHSKLFFKLVQLNNLFAY
WNVNSVLFSNHSPNEALRCLQNSMEIKPSVPVSHDFIFRPISANAKLRMNPRSDVDFSSP
KVDLMVNLSEVAIELNKPQYISILELLGSVDMMSRNLPYRKYRPEVHVHRNAHIWWKYVI
TGILEVDVKPHLHMWSWQHIRCHRETVKCYRELYKKKITSKKPSVELLEKLQATQKSLDI
FNITLARQQAEVEASKAGLRIYRPGKQMEEEESQGWFSWMWNWGGEAEAQTKEVKTGTFD
GLFTVDEKAKLYTAIGYSETAANPNLPKNFEDMKVNFHMEKLSVSIKDEKDKNEIIKLTV
GELKSTLTQRPGAQAIKVTAQLSLFEVTGLAAKRPAPTLLSSRKAATGAGTPLLCFLFET
NPLDDSANQRLHVESQPLEIIYDAITVNNMSEFFRPPDDLQLDELTNATLMKLEQFRDRT
ATGLLYVIETQKVLDLKVNLMASYVIIPQTGFYEGTQNIMLLDLGHFRMSSLSKKDLPQL
SVGSSKIEDIMSRAYDHFDVQLSSLQLLYSKPDGDWKIARKQKRSPLHILEPVDMKVVVS
RAMVVTDTRMAKYKMSGELPLLSLRISDNKLRSVLELVDSIPLPESRPAARSTASSTRPK
QSFTPQLAARKHLSLVDQRSSIIFESCETISIASLGSQEDLFYDAPSSPIGDKAFFPDNP
MPLRYADLSKRTNLIKEDPQKNMTDFIMRFEINELSVQLCRLSGAQEIVVLQLDIEGLGT
ELTLRTFDMMSNTFLREICLKCPEYMDSEDKQVQLITTLDNSEVDLLTLEYIKADKNGPE
FKSQHNNTEQLIKVTFSSLDVHLHTEALLNTMSFLGNLLPPSSKKEGGPEELPTIPEEEE
AEAGKEEEKKGETAVTKKRTSRSSKFADVVNLRVRADLRCLKVFIRGQKARISEISIEGL
VTDVMMRKKNMEILANLKSIVILDCNKDALYKKAVSIADKQVFAFRMLNHTGATEGDAYL
DMSKVDTSVTLEVGCIEVIFLNKFVSSILVFINNFQEAKEALAEVTVQAAEKAASGVKGL
AERSTRIALDVHFNAPVIFLPQSSSSSNVIVADLGFLSVNNRFIKQPFKGDAAIPPVVDK
MTVKLTDLKMYRTTYKNGKFEGETQLLKPVSLDLEIQRNLSANWYHSIPDVEITAHLKPM
SLILCQDDMIVVLRTLSENLSEKSEAVQPPAVLPTPDHSSDSVSNKESQGSGTTGPTSSG
NTVVIAAVVETQKHSKLKTTLKLSFKFDSMTLVLFTPNENVIQHLDCHDEQLKLAEFTLG
TISTSVHMFSDSSMKASVRLSTCLLDDKRPRIKMVTSRMMELRPGAEQNMMVEVNYRQGL
DGTNIDTMVQNVYLCASMEFLLTVADIFLKATKQGFAQGPQAKSSTGGGEKKNINSSVTS
KDSAAGPVSKMEMTVVVRNPEIVFVADLTRADAPALVMTTYCEVLMISGAESTMTASIKD
LKVVACPFLREIRKNNLTTVLQPCQVHYRSSQPAAGPQAMEVEINALSLKVSPVIINTVI
TIQSALTPQAETPEEQESPVPVNLWEKRHWKELKLWFLEEEGDEDTKSLTPLIPQGESLK
LTIGSICVTLEAGVGHLTIPMLLAKSSFHGDVKNWSTLINLHSKLTLEVHYYNEMLGVWE
PLLEPLEDETNERFKSWTLNLKMKKKPVNSPTLSDEVDYNIPDYRTVTTISSKDQLNITL
SKCGLTMLNNLGTAFAEAAKQTAECFQKDEAPFVVKNRLGLSVSVRHSQMFSPVGKQSNG
HTVNLQDGESLGMDYSVTTQSDQFSAMTSLSEKDYYIEPTPEGHTSTSVIPLIKVGRGMY
SVRHNNSGVTRFLICQISSVEGSKYIKIRSPFQIINHFTIPFNIFEGSTCLGIASPTEEF
CVPLDSYRSELSLQPITEETTEEDGKQFDVSEGFSYEDFLYHNPDTRLQRTCRCRGDDSG
VMMTINMVPVKDTVTCKETGDIGENCDIAFVLHLWPSVLLRNLLPYPVAYKLKGSKDSDP
EVTLGPGHSAQLHTAVINQSSLDLRLLDYLAQDWSSEYRLQSEQEEITFIVFQSLRVNEE
DVGDGFERKKPELDIAVHVQYDPGQTVVAIHSPYWMVNKTGRLLQYKADDIHRKHPLDYD
MPLLFSFKPRNFLRNNKVRLMISDSELSDDFSLDTVGSHGDVKCKGRYKDYLVGVKIDAS
SFSLTRIVTFVPFYMLVNSTKHRVFVCEEGLENWTQAEPEQSGIPFWPENDTKRLKIKLE
GCLAPPQTINFTKRENCLLLHLDNSVGGIIVDVNLSDHSATIRFSEYHDGAAPFLLINHT
NECLQFRQSTRKEAPWVADELLDLSFSGEEDSSLKELEWENLDAGKAVYYTWTEPTGSRE
LSWKHGRNQGELKVEKELVDEKTNGEGKLYVIPFYEGLQRVVVFTENQRIFKRLVENESL
RHAEQEVILWLHDMGISLVNNNNSQEISFIGITSSDIVWEIKPKKKGRWKTLSTEEVGML
ENHFREYSDSTPIDNCIADLENNFQVCFTPTGSDMHMLQPVAAPLRRLHLPGVKVEYSIS
PRQRAYRVQIHRIQIQNQIPGAIFPFVFYPIKLPKSIAKDTEPKPLIDLSIVTRTAGHTD
ISRIKYFKVLIQEMDLKLDLGFLYAILDFVTPENAGVMTSEQEVELFTQDIEYIKTELNH
VSSTDTSPISLYEQFHISPIKLHLSFSLSTGGEDGLKRKRETELIPIQSLNLLLKSIGAT
LTDVQDVVFKLGFFELNFQFYTTQQLQSEVIRHYSKQAIKQMYVLVLGLDVLGNPFGLIR
GLSEGVEAFFYEPYQGAIQGPEEFIEGMTIGVKALVGGAVGGIAGAASRITGTIAKGVAA
ITMDEEYQQKRREAMNKQPTGLKDGLARGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGF
FKGFGKGLVGAIARPTGGIIDLASSTFQGIKRATETSQDVISLRPPRFIHEDGVIRPYKE
REGVGSQMLQTIENGRFAKYRYFAHAKINDSDFFMITKRGIFFVTKGTFGQLTCEWQYLF
EEFTMDPKIVGGRRLRIEAKERVKSVFHAKEFGKIINFKTPEIAQWVLSKLEDARDRLPK
C
NT seq
9548 nt
NT seq
+upstream
nt +downstream
nt
gtataaagtatgatgcagaaaaggaggagaagcagctacaggaggctcgtcagagggagc
tcgatcgaatagaggagacaaaactcaaggctgcagaacaagagaacacaaagctagaga
agcaggacacctttgtggaaaagcttgtcacacaagtgatcaaaaacctacaggtcaaga
tctccaacatccatgttcgctatgaggatgatatcactaatccaaactgccctttgtcat
ttggagtgtcgcttaaaaacctcagccttcaaacagctgataatcactggaaacccagtt
tgctagatgaacactccaagcttttcttcaagttggttcagttgaacaacttgtttgcct
actggaatgtcaactcggttctcttctccaatcacagtccaaatgaggccctgcgatgtc
tgcagaacagcatggagatcaaaccctctgttcctgtcagccatgacttcatctttcgtc
ctatatctgcaaatgcaaaactgcgaatgaatccaagatcagacgtggatttctcttctc
ctaaagtggacctgatggtcaacctcagcgaagtggctattgaactcaacaagcctcagt
acattagcattttggagctgctgggctcagtggatatgatgtcacgaaatctgccataca
ggaagtacagacccgaggtccacgttcacagaaatgctcacatatggtggaaatatgtga
tcacaggcatcttggaggtggatgtgaagcctcatctccacatgtggtcctggcaacaca
tccggtgccaccgggaaacagtgaagtgttacagagagctctacaagaagaagatcacca
gcaaaaagcccagtgtggagctgctcgaaaagctgcaggctacacagaaatctttagata
ttttcaacatcacattggcgagacaacaagctgaagtggaggcgagcaaagcaggactgc
gcatttatcgtccagggaaacagatggaggaggaggagtctcagggttggtttagctgga
tgtggaattggggaggagaagctgaggcacagaccaaggaggtcaagactggaacatttg
atgggttgtttactgtggatgagaaagccaaactttacactgccatcggatacagtgaaa
ctgcagcaaaccccaacctgccaaagaactttgaggacatgaaggtcaatttccacatgg
aaaaactgtctgtgtccatcaaagacgagaaggacaaaaacgaaatcatcaaactgactg
tgggggagctcaagtccacactcacacagagacccggagcacaagccattaaagtcacag
cccagcttagtttgtttgaggtcactggtctggccgctaagcgtccggcaccgaccctcc
tttcatcaagaaaggcggccacaggagcaggaaccccgctgctttgcttcctgtttgaga
ccaacccgctggatgacagcgccaaccagaggctccatgttgagtcacaaccactggaga
tcatctatgatgcaataacggtgaacaacatgtcagagttcttcaggcctccagatgacc
tgcagctggatgagctcaccaacgccaccctgatgaaactggagcagttcagagaccgca
ctgccactggtttactgtacgtgatcgaaactcagaaagttctcgacctgaaggtgaact
tgatggcctcctacgtcatcattccacagaccggcttttacgaaggaacccagaacatta
tgcttttggatcttggtcatttcaggatgtccagtttgagcaagaaggatctgccgcagc
tgtcagtgggttccagcaaaattgaagacatcatgtccagagcgtacgaccacttcgatg
ttcagctcagcagcctgcagctgctttacagcaaaccagatggtgactggaaaatagctc
gcaaacagaaacggtctccactccacattctggagcctgtggatatgaaagtggttgtca
gcagagccatggttgtgaccgacacacgtatggcaaagtataaaatgtctggtgaactcc
cgctgttgtcgcttcgaatttctgacaacaaactccgaagtgttctggagctggtggaca
gcatcccactgcctgagagcagacctgcagcccgcagcaccgcttcatctacaaggccga
agcagtcgttcactcctcagctcgctgcgagaaaacacctgagtttagtcgaccagcgtt
cctcgatcatttttgagtcttgtgagaccatcagcatcgcctctctggggtcacaggaag
atttgttctatgacgcccccagctctccgattggagacaaggcgttcttcccggacaatc
ccatgccgctgcgctacgccgatttaagcaaaagaacgaatctcatcaaagaagatcctc
agaagaacatgactgacttcattatgagattcgagatcaatgagttgtctgttcagctct
gtcgtctgtctggagctcaggagatcgtcgttctccaactggacattgagggtctgggca
ctgagctgacgctgcgcaccttcgacatgatgtcaaacaccttcctgcgcgagatctgcc
tgaagtgtcccgaatacatggattctgaagataagcaagtccagctgatcaccaccttag
acaactcagaagttgaccttctcaccttggagtatatcaaagcggataaaaatggtcctg
agtttaagtctcagcataacaacacagagcaactcattaaggtgacgttttcgtctttgg
acgttcatctgcacacggaggctctcctcaacaccatgagcttcctcggtaacctccttc
ctccatccagtaagaaggaaggagggccagaggagctgcccaccatcccagaggaagagg
aggctgaggcagggaaagaggaggagaagaagggggaaacagctgtaaccaagaaaagaa
cctctagaagctcaaagtttgcagacgtggtgaatcttcgcgtgagagccgatctgcgct
gcttgaaggtgttcattcggggacagaaagctcggatatcagagataagtattgaaggtc
tggttactgatgtcatgatgaggaagaagaacatggagatcctagccaacctaaagagca
ttgtgatcctggactgcaacaaggatgccttgtacaagaaggctgtctctattgcagata
agcaagtttttgccttcaggatgttgaaccacacaggggcaacagaaggagacgcctacc
tcgacatgtccaaagttgacacgtctgtcacactggaagtcggctgcattgaggtcattt
tcctcaacaagtttgtctcctccattctggtattcattaataatttccaggaggcgaaag
aagccctcgctgaggtgacggttcaggctgcagaaaaggcagcctctggtgtgaaggggc
tggcagagagaagcactcgaatcgctctcgacgtccacttcaacgcgcctgtgattttcc
tcccccagtcttcctcctcttcaaacgtcatcgttgccgatcttggcttcttgtccgtaa
ataaccgcttcatcaagcagccgtttaagggcgacgctgcaatcccgccggttgtggata
aaatgaccgtgaaactgactgacctcaagatgtacagaaccacttataaaaatgggaaat
tcgaaggcgagactcagctgctgaagccggtcagcctggacctggaaatccaacgaaatc
tttcggccaattggtaccacagcatccctgatgtagagatcactgctcatctaaagccta
tgagtctgatcctctgccaggatgacatgattgttgtcctgaggactttgagcgagaatc
tgtcagagaagtccgaagctgttcagcctccagctgttctgcccacgccggaccactcct
ctgattctgtgtccaacaaagagtcccagggctcaggaaccaccggacctaccagctcag
gcaacacggtggtgatagctgctgtggtcgagacccagaaacacagcaagctcaagacga
cgctcaagctgagcttcaagttcgactccatgacgctggttctgttcacccctaatgaga
atgtgatacaacacttagactgccatgatgaacagctgaagttggcagagtttactctgg
gtaccatctccacttctgtccacatgttctctgacagctccatgaaggcatcggttcgac
tctctacgtgcctcctagatgacaagagaccaagaatcaagatggttacctcaaggatga
tggaactgcggcccggtgccgagcagaacatgatggtggaggtgaactaccgacaggggc
ttgatggtaccaacatagacacaatggtacagaatgtgtacctgtgtgccagcatggagt
tcctgctcacagtggcggatatttttctcaaagccaccaagcagggttttgctcaggggc
cacaagccaaaagcagtactggtggtggagaaaagaagaacattaattcctccgtcacgt
cgaaagactcggctgcaggtccggtgtcaaagatggagatgaccgttgtcgtgcgcaacc
cagagatcgtgtttgttgccgacctgacgcgcgccgacgcccccgccctggtgatgacca
catattgtgaagtgttgatgataagtggagcagagtcaacaatgaccgcctccatcaaag
atctaaaggttgtggcatgccccttcttaagagagattaggaagaacaatctgaccaccg
tcctccagccgtgtcaggttcactatcggagttctcagcctgcagcaggtcctcaggcta
tggaagttgagattaatgctctctctctaaaggtatctcctgtcatcatcaacactgtga
tcaccatccagtcagcgctgacgccgcaggctgagactcctgaggagcaggagagtcccg
ttcccgtgaacctgtgggagaaacgacactggaaggagctcaagctttggttcttggaag
aggagggggatgaagacacaaagtctctaacgccactcattccacagggagagtccttaa
agttgaccataggttcaatctgtgtgactctggaagctggagtgggacacctcaccatcc
caatgcttctcgccaagtcctcctttcacggagatgtgaaaaactggtccacactcatta
acctccacagcaagctcaccctggaggttcactattacaatgagatgctcggcgtctggg
agccgctgttggagcccttggaggatgagacaaacgaacgcttcaaatcttggactctaa
acctgaagatgaagaagaagccagtgaatagccctactttgtcagatgaagtggattaca
acattccagactataggacagtaactaccatcagcagtaaagaccagcttaacatcacgc
tctccaagtgtggactcaccatgctgaacaacctgggcacagcctttgcagaagctgcca
agcagactgcagagtgttttcaaaaggatgaagctccctttgtggtgaaaaacaggctgg
gtctttctgtgtctgtgcggcacagtcagatgttttcccccgtcggcaagcagagcaatg
gacacactgtgaacctgcaggatggcgaaagccttgggatggactactcagtcacgacac
agtcggatcagttctcagctatgacctcgctgagtgaaaaagactactacatagagccta
ctccagagggccacacttccaccagtgtgatccctctgatcaaagtggggcggggtatgt
acagtgtcaggcacaacaactcaggagtcactcggttcctcatctgtcagatttcctctg
tggagggcagcaaatacatcaagatccgctctccgtttcagattatcaatcatttcacga
taccattcaacatttttgagggatcgacatgtctgggaatagcttctccgactgaggagt
tctgtgtaccactggattcatacaggtctgagctgagcctgcagccgataacagaggaaa
ccaccgaggaagacggaaaacagtttgacgtgtcagagggcttcagctacgaggacttct
tataccataatccagatactcgcctgcagcggacgtgccgttgtcgtggagatgattctg
gcgtcatgatgacgatcaacatggtgccagtgaaagacacagtgacgtgcaaggagacgg
gagatatcggagaaaactgtgacattgcctttgtgcttcacctctggccctctgtcctgc
tccgcaatctgctgccttaccccgttgcctacaaattaaaggggagcaaggacagtgacc
ctgaagttacgctgggtccaggccactccgctcagcttcacactgcggtcatcaaccagt
caagtcttgatctccggcttctggattatttggctcaggactggtcctctgaatacagac
tccagagtgagcaggaggaaatcaccttcattgtgttccagtctctacgcgtcaatgagg
aagacgtaggagatgggtttgaaaggaagaagcctgaattggatattgcggtgcatgttc
agtacgaccctggtcagactgttgttgccatccactctccatactggatggtgaataaaa
cagggaggttgctgcagtacaaggctgatgatattcaccgtaaacaccctttagactacg
acatgccgcttctcttctccttcaagcctcgcaattttctgagaaacaataaggttcgcc
tcatgatctcagacagtgagctgtcagacgatttctctctcgacacagttggtagccatg
gcgatgtgaaatgtaaaggcagatacaaagactatctggttggagtgaagattgatgcaa
gcagtttcagtctgacccgcatcgtgacctttgtaccgttttacatgctggtcaacagta
ccaagcacagggtcttcgtctgcgaggagggcctggaaaactggactcaagcagagccag
aacagtcaggtattcctttctggcccgagaacgacaccaagcgtctgaagatcaaattag
aaggatgtttagcgcctccccagacgattaacttcaccaaacgagagaactgcttgttgc
tgcatctggacaactctgtgggcggcatcatcgtcgatgtaaacctgtccgatcactcgg
ccaccattcgattctctgagtaccatgatggggcggccccgttcctcctcatcaaccata
caaacgaatgtcttcagttcagacagagcacccggaaagaggccccgtgggtggctgacg
agctgcttgacctttccttctcaggggaggaggacagctctctgaaggagttggagtggg
agaatctagacgctggaaaagctgtgtattacacctggactgagcccaccgggtccagag
agctgagctggaaacatggacggaaccaaggagagctcaaggtggagaaggaactggttg
atgagaaaacaaacggagaagggaagctttatgtgattcccttttatgaaggtctccagc
gtgtcgtggtgttcactgagaatcagcgtatcttcaagcggcttgtggaaaatgaaagct
tgcgacatgctgaacaggaagtcatcctgtggctgcacgacatgggcatatctttggtca
acaacaacaatagccaagagatttcttttattgggatcacaagctctgacattgtgtggg
agatcaagccgaagaagaaaggtcggtggaaaaccctgagcacagaagaagttgggatgt
tggagaatcacttcagagagtactctgattccacgccgattgacaactgcatcgctgacc
tggagaacaactttcaggtctgttttacgcccactggttcagatatgcacatgctgcagc
cagtggctgctcctctgaggcgactccacctccccggggtgaaggtggagtacagcatct
cacctcgacagagagcctaccgtgtccaaatccaccggatacagatccagaatcagatac
caggagccatcttcccttttgtcttttaccccatcaaactccccaaatccattgccaagg
acacagaaccaaaacctctaattgatctcagcattgttaccagaactgctggacacaccg
acatctctcgcatcaagtacttcaaggttttgattcaggagatggatttaaagcttgacc
tgggctttctgtatgccatcctggactttgttactcctgagaacgccggcgtcatgactt
cagaacaggaggtggagctgtttactcaggacatagagtatataaaaacggagctgaacc
atgtctcttctactgacacgtcacccatcagcctctatgagcaattccacatttccccta
tcaagttgcatttgagtttctctctgagcacaggaggagaagacggcttaaagaggaaga
gagaaactgaactcatccccattcagtccctcaacctgctgctgaagagcatcggagcaa
cgctcactgacgtgcaggacgtcgtcttcaagctgggattctttgagctaaacttccagt
tttacaccactcagcagctacaatcggaggtcatcagacattactccaagcaggctatta
aacagatgtatgttttggtgctgggcctggacgtgcttggaaatcccttcgggctgatca
gaggattgtcggagggcgtcgaagcgttcttctacgagccctaccagggagccatccaag
gtcctgaagagtttatagaaggaatgaccatcggtgtgaaagctctggttggaggagctg
ttgggggtatcgcaggcgcagcctctaggataacggggaccatcgcaaagggagtcgctg
caataaccatggatgaggaataccagcagaagaggcgagaagccatgaacaaacagccta
caggcctgaaagacgggctggccagaggcgggaaaggattggtttctggattcgtcagtg
gaatcacaggcattgttaccaaacctataaaaggggcgcagaaagagggagcagcgggct
tctttaagggttttggcaaaggtttggtgggtgcgatagctcgaccgacaggaggcatta
tcgacttggccagcagtacttttcagggaatcaaaagggcaacagagacctctcaggatg
ttatctctctccgtcctcctcgcttcatacatgaggacggtgtcatccgaccatataagg
agagagagggcgtcgggagtcagatgctccagacaattgaaaacggacgttttgccaagt
atagatactttgctcatgccaagattaacgattcagacttcttcatgatcaccaagagag
gaatattttttgtgactaaaggcacctttggccagctgacctgcgagtggcagtatctct
ttgaagaattcacaatggacccaaagattgtcggtggacgtcgacttcggattgaagcca
aggaaagagtgaaatcagtcttccatgccaaagagtttgggaagatcataaacttcaaaa
cgccagagattgcccagtgggttctcagcaaactggaggatgccagagatcgtttgccta
aatgctaa
DBGET
integrated database retrieval system
