KEGG   Poecilia latipinna (sailfin molly): 106964639
Entry
106964639         CDS       T08005                                 
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
plai  Poecilia latipinna (sailfin molly)
Pathway
plai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:plai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106964639 (exosc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plai03019]
    106964639 (exosc1)
Messenger RNA biogenesis [BR:plai03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     106964639 (exosc1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     106964639 (exosc1)
SSDB
Motif
Pfam: EXOSC1 ECR1_N S1_RRP4
Other DBs
NCBI-GeneID: 106964639
NCBI-ProteinID: XP_014915756
Ensembl: ENSPLAG00000005880
LinkDB
Position
Unknown
AA seq 204 aa
MRLLCALPENMSPLRLCVPGEKLCSVGDCNQGTGVYQRHGYIYSSLAGYVMRKNEGEELP
VISVVRETEALLLPDVGAIVTCKVTGINSRFAKVHILYVGSTPLKDRFRGTIRKEDVRES
EKDKVDIYKSFRPGDIVLAKVISLGDVQSTYLLTTAENELGVVVAHSEAGAQMIPISWRE
MQCPQTNAKEFRKVARVQPEYLEA
NT seq 615 nt   +upstreamnt  +downstreamnt
atgaggttgctctgtgctcttcccgaaaacatgtcgcccctgagattgtgtgtcccaggt
gagaaactatgcagtgtaggagactgtaatcaaggcaccggagtgtatcagcgacatggc
tacatctactcctccctcgctggctacgtaatgaggaagaacgagggagaggagctgccg
gtgatctcagtggtgagggaaactgaagcactgctgctgccagacgttggagccatcgtc
acctgcaaggtgactggcatcaactccaggtttgcgaaggtccatatcctctatgtgggg
tccactccactgaaagaccgcttcagagggaccatcagaaaggaagacgtgcgagagtcg
gagaaagacaaggtggacatatacaaaagcttcagacctggtgacattgtcctggcaaaa
gtcatttcgctcggggacgttcagtctacctacctgttaacaacagctgagaacgagctg
ggcgtggtggtggctcacagcgaagcaggtgcccagatgattcccatcagctggcgtgag
atgcagtgcccgcagaccaacgccaaggagtttcgtaaagtggcccgagttcagcccgag
tatctggaagcctga

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