Candidatus Planktophila dulcis: A1s21155_00095
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Entry
A1s21155_00095 CDS
T05051
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
plak
Candidatus Planktophila dulcis
Brite
KEGG Orthology (KO) [BR:
plak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plak03032
]
A1s21155_00095
03400 DNA repair and recombination proteins [BR:
plak03400
]
A1s21155_00095
Enzymes [BR:
plak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A1s21155_00095
DNA replication proteins [BR:
plak03032
]
Prokaryotic type
DNA Topoisomerases
A1s21155_00095
DNA repair and recombination proteins [BR:
plak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A1s21155_00095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ASY11426
UniProt:
A0AAC9YRU8
LinkDB
All DBs
Position
20602..23364
Genome browser
AA seq
920 aa
AA seq
DB search
MAKNLKKLVIVESPAKARKIGGYLGDGYIVEASVGHIRDLPQRAADIPKEVKKLAWSKEG
VDIENDFAPLYVINPDKKAKVAELKELMKDAEEILLATDEDREGEAIAWHLVEVLQPKIP
IKRMVFNEITEEAIKAAVENTRDLDYNLIDAQETRRVLDRLYGYRLSPVLWKKVMPRISA
GRVQSVATRLIVEKERERMAFISSSWWDLNAKTELGFTARMLSVDGKKVASTADFGADGA
VKEKSLKDILLLDEKQATALTESLKNTPLTVKSMEESPRTERPKPPFTTSTMQQDAGSRL
GWGAQITMRIAQRLYENGYITYMRTDSINLSDQAIRAARAAATSLYGKDHVYETARVYQG
KSKNAQEAHEAIRPAGDVFKTPGELAPELSRDEFALYDLIWKRTVASQMADAKKMQMRVD
FDAQTADKKETIFRANGSVITFPGFLAAYDDIATDENKDEESEDRRLPAMTIGQSVKVDE
YSCEGHDTKPPARYTEPTLVKKLEELGIGRPSTFASIIQTIQDRGYVSKRGRALVPTFLA
FSVTGLLETHFTKLVDYDFTASMEEDLDKIAAGEAGRVDWLRDFYYGVDGQPGLNELSLD
LGVIDARATNTMNLSDTIEIRVGRYGAYLQENIPDQDRKLANIPENLAPDELTLEKAIEL
LAAPSGERELGVDPKTNFEVVAKSGRFGPYITEIFPEEPVELNDKGEPKKKRKKADAPKP
KTASLLSTMNLDTITLDDALKLLSLPRVLGTNSAGDEITVQNGRYGPYLKAGADSRTLTS
EDQLFSINLDEALEIYSKPKERRRGVAKPPLKELGVDPGSEKQVIIKDGRFGMYVTDGET
NATLRRGDTLEAMTLERGLELLAGRRAWEAENGPSPKKSRKKAAKVKPGDAAPTLTKNTV
KKAATKKKAAKKATGKAKKA
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaacttgaagaagctggtgattgttgagtcccctgcaaaagcacgcaaaatt
ggcggctacctcggcgatggttacatcgtcgaggctagcgttggccatattcgcgatctg
cctcagagggccgcagatatccctaaagaggtaaagaagctggcctggtctaaagaaggc
gtcgatatcgagaatgatttcgcacctttatatgtcatcaaccccgacaagaaggcgaaa
gttgccgagctgaaggagttgatgaaggacgctgaagagatccttcttgcaactgacgaa
gaccgcgaaggcgaagcaatcgcttggcacctcgttgaagtactacagccaaagattccg
attaagcgcatggtctttaacgagatcaccgaagaagcaatcaaggcagcggttgaaaac
acccgcgaccttgattacaacctcatcgatgcgcaagaaacccgccgtgttctagatcgt
ctctatggttacaggctgtcaccggtgctatggaagaaagtgatgccgcgtatttcagcg
ggacgcgtgcaatctgttgcaacccgccttattgttgaaaaagaacgtgaacgcatggct
tttatctcttcctcttggtgggatctcaatgcaaagacagagctcggctttaccgcgcgc
atgctttcagtagatggcaagaaagtagcctccaccgctgacttcggagcagatggcgcc
gttaaagagaagtcactcaaagacattctcttactcgatgagaaacaagctacagctctt
actgaatccctaaagaacacaccgctgaccgttaagtcgatggaagaaagcccacgcact
gaacgccctaagccaccatttacaacgtcaacaatgcaacaggacgcaggttcacgtctt
ggttggggcgcacagatcaccatgcgcattgcgcagcgcttgtacgaaaacggttacatc
acctacatgcgtacagactcaatcaacttatctgatcaagcaatcagagctgcccgcgct
gctgcaacttcgctttatggaaaagatcatgtctacgaaaccgctcgtgtctaccaaggt
aaatctaagaacgcacaagaagcgcacgaagctatccgcccagcaggagatgtttttaag
actccaggtgagttagccccagagctatctcgtgatgaattcgcgttgtatgacctcatc
tggaagcgcaccgttgcatcacaaatggctgatgccaagaagatgcagatgcgcgttgat
tttgatgcacaaactgctgataagaaagaaactatcttccgcgccaacggttctgtcatt
acattcccaggattcctcgctgcctacgatgacatcgcaacagatgagaataaagatgaa
gaatcagaagatcgacgccttcctgcaatgactattggtcaatcagtcaaggtcgatgaa
tactcatgcgaaggccatgacacaaagccacctgcgcgctacaccgaaccaactcttgtt
aagaaacttgaagaactcggtatcggccgcccatcaacatttgcatccatcattcaaact
attcaagatcgtggctatgtctcaaagcgcgggcgagcacttgttcctacattcctagca
ttttctgtaacaggcttacttgaaacccacttcacaaagcttgtggattatgacttcacg
gcatcaatggaagaagatctcgacaagattgcagcgggtgaggcaggacgcgttgattgg
ctccgtgatttctactacggtgtcgatggtcaaccagggcttaatgagctctcactagac
cttggtgtgattgatgcgagagctaccaacacaatgaatttatctgacaccatcgaaatc
cgtgttggtcgctacggtgcgtacttacaagaaaacatccctgatcaagatcgcaagctt
gcaaatattccagaaaatctagcacccgatgaactcacgcttgaaaaagcaattgaactc
cttgcggccccttcaggtgaacgcgaactcggcgtagatccgaagacaaacttcgaagtc
gttgcaaagtcaggacgcttcggtccatacatcaccgagatcttccctgaagaacctgtt
gaacttaacgacaaaggcgaaccaaagaagaagcgcaagaaggcagatgcgccaaagcca
aaaactgcttccctcttaagcaccatgaacctcgacaccatcacactcgatgatgcgctc
aaactcttatctcttcctcgcgtacttggcaccaacagcgcaggagatgaaatcaccgta
cagaacggccgctacggtccatatctaaaggctggcgcagattcacgcacgcttacatcg
gaagaccaactcttctctatcaacctcgatgaagcacttgagatttactcaaagccaaag
gaacgccgccgtggtgttgcaaagccaccactgaaagaactcggcgtggatccaggcagt
gaaaaacaagtcatcattaaagatggaagatttggtatgtatgtcaccgatggtgaaacc
aatgcaacgctccgtcgtggtgacacgttagaggcaatgactctcgagcgcggactcgaa
ctccttgccggccgccgcgcatgggaagccgaaaacggcccttcgcctaaaaagtcacgc
aaaaaggcggcgaaagttaagccaggggacgcagccccaactcttacaaagaacacagta
aagaaggcagcaacaaagaagaaagctgccaagaaagccacaggaaaagcgaagaaggct
taa
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