Candidatus Planktophila dulcis: A1s21155_00530
Help
Entry
A1s21155_00530 CDS
T05051
Name
(GenBank) ATP-dependent RNA helicase RhlE
Organism
plak
Candidatus Planktophila dulcis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASY12670
UniProt:
A0AAC9YUD2
LinkDB
All DBs
Position
106733..108895
Genome browser
AA seq
720 aa
AA seq
DB search
MSLQTRTAAPGKARRAAKGKPRHTTAEKAARKAVVAKPAARGTAKRSAPVKEAASTAART
TAKTTRYSDRETGTKKEVRLADRSKLRAQRFQERTASKSKNVEGAIKGNPKQSREERTFE
KPKRAFKPAGAKPVVGRTAPERTAKPQSRAAKFIADRTERSERPFRPERLERPAKSDVRP
TTRREAVKAKVAHSDDGRPNFVPQKREKYNPAAPQSAAQRRGDSPRTPAKPPRDRRNDSR
GESPAYARDDFRASKTHNKAAVDFGADDNYISVNLADANLVEATPLTEVTTSFRDLGIAP
ALANALNAQGITHPFPIQIATLPDALAGHDILGRGQTGSGKTLAFSLALLTNISDKTARP
HKPLALILTPTRELAQQIDEVLRPLARAVGHESVVIAGGMPYAKQITAMRKATAILVATP
GRLIDLLNKNEVQLDQLQITVLDEADQMADMGFLPVVKEILDQARLDGQRLLFSATLDRG
VDSLVRQYLKNPKTHSLQNDRASVSTMEHHVLQMHPGDKDDITSQIAARNGKTILFVKTQ
RGADRLADKLANAGVPVGALHGGKSQAVRTRTLALFKEQDNSALVATDVAARGIHVDGIS
LVVHVDLPQDHKDYLHRSGRTARAGESGTVVTLSSSKNQRAVSGLLGRAGVTPKFHDVRP
LDEKLMVITGAQEPSGVPYIPPVMERKSPGGSRSGGGARRGGSGSGKSGGYRGGNSRRGR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtctctacaaacccgtactgctgcgcccggaaaagctcgtcgcgctgccaaaggtaaa
ccccgccacacaactgccgagaaggctgcccgtaaggctgtcgttgcaaagccagctgct
cgcggaactgcaaagcgaagcgctcctgtgaaggaagcagcatctactgcagcacgcaca
acagctaagaccacacgttattcagatcgcgagactggtactaagaaagaagtacgtctt
gcagatcgttccaagctacgcgcacagcgttttcaagagcgcacagcatcaaagtctaag
aacgtcgagggtgccattaagggcaacccaaagcagtctcgtgaagagcgcacctttgaa
aagccaaagagagcctttaagccagctggtgcaaagcctgttgtgggccgcacagcacct
gagagaactgcaaagccacaatcccgtgctgcgaagttcattgcagatcgcacagaacgt
tcagagcgtccatttcgtccagagcgtttagagcgtccagcaaaatcagatgttcgccca
acaactcgtcgcgaagcggtgaaggcaaaggttgctcactcagatgacggccgtccaaac
tttgttccacaaaagcgcgaaaaatataatcctgcagcaccacagtcagcggcgcagcgt
cgtggagattctccccgcacacctgcaaagccaccacgcgatcgccgcaatgattcacga
ggtgaatctccagcatatgcacgcgatgatttccgcgcatcaaagactcataacaaggca
gctgtcgatttcggcgctgatgataattacatttcagtaaacctcgcagatgcaaacctt
gttgaagcaacaccactcacagaggtaacaacatcattccgtgacctcggtattgcaccg
gcgctcgcaaatgcactcaatgctcaaggcattacgcatccattcccaatccagattgca
acacttcccgatgctcttgcaggtcatgacatcttgggacgtggacagactggttcagga
aagactcttgcattcagccttgcactccttacaaatatttcagataagacagcgcgccct
cacaagccactggcacttatcttgacccctacacgcgaactcgcgcagcagattgacgaa
gttcttcgtccattagcacgcgctgttggccatgaatcagtcgttatcgcaggcggaatg
ccatatgcaaagcaaatcactgcaatgcgtaaggcaacagcaatcttggttgcaactcct
ggtcgcttgattgaccttctgaataagaatgaagttcagctcgatcaacttcagatcact
gttcttgatgaagcagatcagatggcagatatgggatttcttccagtagtgaaggaaatt
cttgatcaggcccgtcttgatggacagcgtcttctcttctcagcaactctcgatcgcggt
gttgactcactcgttcgtcagtacctgaagaaccctaagactcactcattgcagaatgac
cgtgcttcagtttcaacaatggagcaccacgttcttcagatgcaccctggcgataaagat
gacatcacatcacagattgcagctcgtaatggaaagacaattctctttgtaaagactcag
cgcggtgcagatcgtcttgctgacaagctagctaacgctggtgttccagtcggtgcgctg
cacggtggaaagtcacaggcagttcgtactcgcacacttgcactctttaaggagcaagat
aattcagctctcgttgcaaccgatgttgcagcacgcggaatccacgttgatggaatctca
cttgttgttcacgttgatcttccacaagatcacaaggattacttgcaccgttcaggtcgc
acagctcgcgctggcgaatcaggaactgttgttaccttgtcatcatcaaagaatcagcgt
gcagtatctggtcttctcggtcgtgcaggtgtgacaccgaagttccacgatgtgcgccct
ctcgatgagaagctcatggttatcactggtgctcaagagccatcaggtgttccatatatt
ccgccagtaatggagcgaaagagcccaggtggttcacgttcaggtggcggagctcgtcgc
ggtggttcaggttcaggtaagtctggtggataccgtggtggcaatagccgccgtggccgc
taa
DBGET
integrated database retrieval system
