Candidatus Planktophila dulcis: A1s21155_02630
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Entry
A1s21155_02630 CDS
T05051
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
plak
Candidatus Planktophila dulcis
Pathway
plak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A1s21155_02630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plak03400
]
A1s21155_02630
Enzymes [BR:
plak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
A1s21155_02630
DNA repair and recombination proteins [BR:
plak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
A1s21155_02630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ASY11875
UniProt:
A0AAC9YSX4
LinkDB
All DBs
Position
complement(508805..509668)
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AA seq
287 aa
AA seq
DB search
MSKAIKKPRIGAHTPTSGGMAKRSIAYAELTQAEAIQVFTSNPRGWAMPETNHEADAIFR
EKAQALDIETYVHAPFLINLGSPTHETYVNSLASTAYSLKRGQEIGALGVVVHTGSAVKE
DNVDNAWKQIKKGVMPILEALDDDAPYLLLEPTAGQGQSLVKRLEDLENYLKALEYHPKV
GICLDTCHVFAAGHDIAKKGGMKETLDLLVQVAGIERIQLIHANDSMDVCGALKDRHQNI
GKGFIGVDPFAELLKHPAVANAPLILETPGMEPEHGEEIALLKKLRG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggccatcaagaaaccacgaatcggtgctcacactccaacatctggaggaatg
gctaagcgctccattgcatatgcagagctgactcaagctgaagcgattcaagtcttcaca
tctaacccccgtggctgggcgatgcctgagaccaatcatgaagcagatgcaatatttcgt
gaaaaggctcaagcactcgatattgaaacttatgtccacgcaccatttcttatcaactta
ggctcacctacgcatgagacctatgtaaattcattggcatcaactgcatattccttaaag
cgcggacaagaaatcggcgcactcggagttgtagttcacacaggctctgcagttaaagag
gataacgttgataatgcatggaagcagattaaaaaaggtgtcatgccgatccttgaagca
ctcgatgatgatgcgccctatctactcttagagccaacagcgggccaaggtcaatcactg
gtcaagcgtcttgaagatttagagaactatctcaaagcactggaataccatcccaaagtt
ggcatctgtcttgatacatgtcacgtctttgcagcaggccatgacattgcaaagaagggt
ggaatgaaggagaccctcgaccttctggttcaagtcgctggcatcgaacgtattcaactc
atccacgccaatgattcgatggatgtgtgtggtgccctcaaagatcgccatcaaaatatt
ggtaagggctttattggtgtcgatccctttgctgaactcctaaagcacccagcagttgcc
aacgcgccgctcattcttgaaactcctggcatggaacctgaacatggtgaggaaattgct
ctcttaaagaagttgcgtggatga
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