Candidatus Planktophila dulcis: A1s21155_03365
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Entry
A1s21155_03365 CDS
T05051
Name
(GenBank) ATP-dependent RNA helicase HelY
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
plak
Candidatus Planktophila dulcis
Brite
KEGG Orthology (KO) [BR:
plak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plak03019
]
A1s21155_03365
Enzymes [BR:
plak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A1s21155_03365
Messenger RNA biogenesis [BR:
plak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A1s21155_03365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
AAA_22
IstB_IS21
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ASY12006
UniProt:
A0AAD0E5K1
LinkDB
All DBs
Position
complement(664237..666612)
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AA seq
791 aa
AA seq
DB search
MTTPAERFAAAKVRGQHPLTIEFIEQFDFGFDEFQIIACQAVEDGKGVLVAAPTGAGKTV
VGEFAAFSALAQGKKCFYTTPIKALSNQKFQEFVERFGEDRVGLLTGDTNINSEADILVM
TTEVLRNMLYANSSTLKNLGSVVMDEVHYLADKSRGAVWEEVLIHLMESVQVISLSATVS
NAEEFGDWLGEVRGSTEVIVSEVRPIPLYQHVLIGDRLVDLFREQGRINPEILGLEREAL
RQVRTPRHRRERFGESDNRLTRPDIIEKLQRENLLPAITFIFSRAGCDAAVKQCLAAGLK
LTTTEERVEIAATAAKYTQNLAEEDLEVLGYRDWLIALERGVAAHHAGLLPSFKGAVEDL
FKRGLVKAVFATETLALGINMPARTVVLEKLTKWNGEAHVSITPGEYTQLTGRAGRRGID
IEGNAVVQWSPTVDSATAAGLASTRTYPLRSSFTPTYNMSINLIARFGRERAHGSLESSF
AQFQADRAVVGLVRQIKKNNSAAAELTDSAQCHLGDFSDYSRMRRDIKEMERLLSKRDGR
RGIDQRQRVKLENELDGMRRALRQHSCHACNDRETHARFAEKADRLNRESDGLRDRVENR
THVIAKTFDRICDVLTHLGYIEGEKPLEQGKILAKIFAESDLLLTESIRRGVFDSLTPPE
LLSVASAMIYQGRSTEAYAPKMPNDNVANALVAVSKIWIELEAIENQFDVKTQREPDFGF
CYAAYRWANGHSLSSVLKGTDMTVGDFVRSIKQLIDLLTQIGGAAEELRPACRDGIKRLD
RGVISYMLGDL
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgacaactcctgcagaacgatttgctgccgccaaggtgcgcggccaacatccactcacg
atcgaattcatagagcaatttgatttcggttttgatgaattccagattattgcctgccaa
gccgttgaagatggcaaaggggtccttgtcgcagctcctacgggtgcaggaaagactgtc
gttggcgaattcgcggcctttagcgcactcgcccaaggcaagaagtgtttctatacaact
ccaattaaggcgttatcaaatcagaagttccaagagtttgtagagcgttttggcgaagat
cgggtggggctcttaacgggcgataccaatatcaactcagaagcagatatcttggtcatg
actaccgaggttcttcgcaatatgttgtatgcgaactccagcacactgaagaacttaggt
tctgtagtcatggatgaggtccattaccttgctgataagtcgcgaggtgcggtgtgggaa
gaagttctaatccacctcatggagagtgttcaagtcatctcactttcagccaccgtttcc
aatgctgaagaattcggagattggctaggagaagtcagaggctcgacagaagtaattgtt
tctgaagtgcgacctattccgttatatcagcatgttctcatcggtgatcgacttgttgac
ctcttccgcgagcaagggcgcatcaaccctgaaatcttgggacttgagcgcgaagcgctt
cgacaagttcgtaccccacgacatcgacgtgaaagattcggtgagagcgataacaggctg
acacggccggacattattgagaagttgcaacgggagaatctccttcctgcgatcaccttt
atcttctctcgcgctggatgcgatgcagctgtgaagcagtgcttggctgcagggctaaag
ctcacgacaaccgaagagcgagttgagattgcggcaactgctgcaaaatacacacagaat
cttgccgaagaggatctagaagttcttggttatcgtgactggctcattgctctcgaacgg
ggagtggccgctcaccatgcaggtctattacctagctttaaaggcgcagtcgaagatctt
ttcaaacggggacttgtgaaggccgtctttgccacagaaacgttggcacttggaatcaat
atgccagcgcgcacagtagttcttgaaaaacttaccaaatggaatggtgaggctcacgtc
tcaatcactccgggggagtacacacaactcactggccgtgctggccgtcgcggcatcgat
attgaaggcaatgctgtcgtgcaatggtcgcccacagtggattcagcaactgcagctggc
cttgcatcgactcgaacctatccacttcgttcctcatttactccgacgtacaacatgtca
atcaatctcattgctcgttttgggcgagagagagcacacggaagccttgaatcttccttc
gctcaattccaagcagatagggcagttgtcggcctagtaaggcagataaagaagaacaat
tcagctgccgcagaacttacggattcggcgcaatgtcacctgggagatttcagcgattac
tcgcgcatgcgaagagatattaaggagatggagagattactcagtaagcgagatggtcga
cgcgggatagaccaacgtcaaagagtcaaacttgagaacgaactcgatggaatgcgccga
gctcttcgccaacattcatgccatgcatgtaatgatcgtgaaactcacgcccgttttgct
gagaaggccgatcgactcaatcgtgaatctgatggtttacgtgatcgggttgagaaccgc
actcacgttattgccaagacttttgaccgcatctgtgacgttctcacacaccttggatat
atcgagggggagaagccacttgaacagggcaaaatccttgccaagattttcgcagaatcc
gatctcttgctcacagaatctattcgacgcggagtcttcgactcactaacaccaccagag
ctcttatcggtggcctcagcaatgatttatcagggtcgaagtactgaagcttatgcaccc
aagatgccgaatgacaatgtggcaaacgcactcgttgctgtctcaaagatctggattgaa
ttggaagctattgagaatcaatttgatgtaaagacacaacgcgaaccagatttcggattc
tgttacgcagcatatcgatgggcaaacggtcactccttaagtagcgttcttaaaggaact
gatatgactgtgggagatttcgtacgaagcattaagcaactcatagacttgctcactcaa
ataggtggagcagctgaagagctacgacctgcttgtcgcgatgggataaaacgcttggat
agaggcgtaatctcatatatgttgggcgatctatga
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