Candidatus Planktophila dulcis: A1s21155_04305
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Entry
A1s21155_04305 CDS
T05051
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
plak
Candidatus Planktophila dulcis
Pathway
plak03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plak00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
A1s21155_04305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plak03019
]
A1s21155_04305
03009 Ribosome biogenesis [BR:
plak03009
]
A1s21155_04305
03036 Chromosome and associated proteins [BR:
plak03036
]
A1s21155_04305
Enzymes [BR:
plak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
A1s21155_04305
Messenger RNA biogenesis [BR:
plak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A1s21155_04305
Ribosome biogenesis [BR:
plak03009
]
Eukaryotic type
90S particles
RNase
A1s21155_04305
Prokaryotic type
rRNA processing factors
A1s21155_04305
Chromosome and associated proteins [BR:
plak03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
A1s21155_04305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
ASY12729
UniProt:
A0AAC9YUY9
LinkDB
All DBs
Position
complement(850908..851621)
Genome browser
AA seq
237 aa
AA seq
DB search
MTAVRFSRSDLFSKLLEQLGVELSPELLELAFTHRSFAYETGITTTNERLEFLGDSVLGL
IVTEELYLKYPDLDESRLSPLRSGIVNMRALADIARTLDLGTYIRLGKGEEVTNGRDKNS
LLADALEALIGAIYLGCGFTQCTEVVKRLIADTLESAMAKGAGLDGKTALQELLASLGKG
SPEYLVTETGPDHDKSFTAVAMVTGEAIAQGLGKSKREAEQSAARTAFEILSQQQPI
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
ataaccgccgtcaggttctcgaggtctgatctgttctcaaaacttcttgagcaattaggt
gttgaactttctcctgaactgctcgagttagcttttacccaccgctctttcgcctatgaa
accggtattacaactaccaatgaacgtcttgaatttctcggtgattctgtattaggtctg
attgttactgaagagctgtatttaaagtatcccgatctcgatgaaagtcgtctctctcca
ctgcgttcaggcattgtcaatatgcgtgcgctcgcagatatcgctcgcacccttgatttg
ggcacatacattcgtcttggaaaaggtgaagaagtcaccaacggtcgcgataagaattca
ctccttgcagatgctttagaggcgctcattggcgccatttatcttggctgtggctttacg
caatgcaccgaagtagtgaagcgattaattgcagatactctcgaaagtgccatggcaaag
ggcgcaggccttgatggaaagacagctcttcaagaattacttgcctcccttggtaagggc
tcacctgaatatctggtgactgagacaggtccagatcacgataaaagttttacggcagtt
gcaatggttacaggagaagcaatcgcgcaaggccttggaaagagcaagcgagaggctgaa
caatcagctgcacgcactgcttttgaaatactttctcaacaacagcccatttaa
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