Candidatus Planktophila dulcis: A1s21155_04875
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Entry
A1s21155_04875 CDS
T05051
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
plak
Candidatus Planktophila dulcis
Pathway
plak03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plak00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
A1s21155_04875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plak03019
]
A1s21155_04875
03009 Ribosome biogenesis [BR:
plak03009
]
A1s21155_04875
Messenger RNA biogenesis [BR:
plak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A1s21155_04875
Ribosome biogenesis [BR:
plak03009
]
Eukaryotic type
Pre-60S particles
RNases
A1s21155_04875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ASY12279
UniProt:
A0AAC9YU31
LinkDB
All DBs
Position
960967..961551
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AA seq
194 aa
AA seq
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MATELPHLIWIDCEMTGLDLATDALVEIAVLVTDSELNVIGEGVDVVIHATEGQLASMND
FVREMHTASGLITEIPKGITMSQAEEQILTYLQSAGVEAGKSPLAGNSVSVDRNFIARDM
SALNGYLHYRTIDVSSIKELARRWYPKTYFAAPAKTGNHRALGDIRDSIAELAYYRAALF
INSDNNSTTAESNG
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgaactcccccacctgatttggatcgattgtgagatgacgggcttagacctt
gcaaccgatgccctggtggagattgccgtccttgtcaccgactcagaactgaacgtcatc
ggtgaaggcgttgatgtcgttatccatgcaaccgaaggccaactcgcatcgatgaatgac
tttgttcgcgaaatgcacacagcctcaggtttgattactgagatccccaagggcatcacg
atgtctcaagctgaagaacagatacttacctatctgcaatctgcaggagtagaggcaggc
aaatctcctttagctggtaattcagtatcggttgatcgcaacttcatcgctcgcgatatg
agcgcactcaatggctaccttcactaccgcaccatcgatgtctcatcgattaaagagcta
gcccgtcgctggtatcccaagacctactttgcagcccctgccaagactggcaaccaccgc
gcactcggagatatccgcgactccatcgctgaattggcctattaccgagcggctctcttc
atcaatagcgataacaattcgaccactgcagagtcgaacgggtaa
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