Candidatus Planktophila dulcis: A1s21155_05380
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Entry
A1s21155_05380 CDS
T05051
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plak
Candidatus Planktophila dulcis
Pathway
plak03420
Nucleotide excision repair
plak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A1s21155_05380
03430 Mismatch repair
A1s21155_05380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plak03400
]
A1s21155_05380
Enzymes [BR:
plak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A1s21155_05380
DNA repair and recombination proteins [BR:
plak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A1s21155_05380
MMR (mismatch excision repair)
Other MMR factors
A1s21155_05380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
DEAD
ResIII
DUF5128
Motif
Other DBs
NCBI-ProteinID:
ASY12370
UniProt:
A0AAC9YTT8
LinkDB
All DBs
Position
complement(1055487..1057730)
Genome browser
AA seq
747 aa
AA seq
DB search
MTTTDPLLDGLNPQQQKAVAHAGSPLLVVAGAGSGKTRVLTRRIAYIMARREVRPYEILA
ITFTNKAAGEMKERVSELVGPVAKSMWVSTFHSSCVRMLRQEVERLGYSSTFSIYDSADS
QKLISRVMETLNIDSKRYPARQFQNLISNAKNELQTPYEYLSHATNQFETIVADVYTMYE
KRLQQANAMDFDDLIMKTVQVLQKFPEAKARFRSRFRHILVDEYQDTNHAQYQLVKELTG
VEGDGFPLAELCVVGDADQSIYGFRGATIRNILQFEVDYPNAATVLLEQNYRSTQNILNA
ANAVITKNESRKEKNLWSDAGSGAPLVGYVAESEYDEAEFIKSEIRSLQDMGHSNPGDTA
VFYRTNAQSRIFEEIFMRAAIPYKVVGGLRFYERKEVKDLLAYLRVLVNPDDEVSIRRII
NLPKRGIGDRALEEVEIFAEAQGISFWNALLRVSEATSVPNKAAQSIASFTSMLIALQTL
VEAKTKPSVIIEAVLEQSGLLTELEASKDPQDEVRVENLKELVSASMEYEERPFEELGED
EEISLSGFLEKVSLVADADEIPDGEDHGGVVTLMTLHTAKGLEFPTVFLTGMEDGIFPHA
RTLDDPKQIEEERRLAYVGLTRAEKRLYISRAEYRLTFGTPKYNPGSRFLDEIPSELIEW
KNEGRSTFTTSSAVKKSRLPSGPPPRATGKKSTAMVLEVGQRVSHDTFGLGTVVALAGEG
DKSEATINFGQYGDKRLLLRYAPVTTL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaccgacccattgctggatggactcaatccccagcaacaaaaggccgttgcc
cacgctggttctccactcttagtagtcgcaggtgctggatctggaaagactcgagttctt
actcgtcgcatcgcatacatcatggctcgtcgcgaagttcgcccctatgaaatcttggca
attaccttcaccaataaggcagctggtgagatgaaagagcgtgtgagcgaacttgtggga
ccggttgctaaatcaatgtgggtctcaacatttcactcatcctgtgtgcgcatgctgcgc
caagaggttgaacgtcttggatatagcagcacatttagcatctatgactcagcagattca
cagaagctgatctcacgtgtgatggagactctcaatattgattccaagagatatccagcc
cgtcaattccagaacctgatttctaatgcaaagaatgaacttcaaactccgtatgagtat
ttaagccatgccaccaatcaattcgagaccatcgtcgccgatgtttatacgatgtatgaa
aagcgcttgcagcaggcaaatgcgatggactttgatgacttgattatgaagactgtgcag
gttctgcagaagtttcctgaagctaaagcgcgctttcgctcccgctttcgccacatcctt
gtcgatgagtatcaggacaccaaccatgcgcaatatcaattggtaaaggaactcaccggt
gttgaaggagatggcttcccacttgcagagctctgcgttgtgggagatgctgatcaatct
atctatggattccgtggtgcaaccatccgcaatatcttgcaatttgaggttgattacccc
aatgctgcaacagttttgcttgaacaaaattaccgttcaacacagaatattctcaacgct
gcaaatgctgtgattaccaagaatgaatcacggaaagagaagaacctttggtctgatgca
ggatctggtgcaccacttgttggttatgttgctgaatctgaatatgacgaagcagagttc
attaagagtgaaattcgttccttacaggatatgggccactccaatccaggagatacagcg
gtcttctatcgcaccaacgctcaatctcgtatctttgaagaaatctttatgcgcgctgca
atcccttataaagtcgtgggtggtcttcgattctatgaacgtaaagaggtcaaggattta
ctcgcctaccttcgcgttctagttaatcccgatgatgaagtttcaatccgccgcatcatc
aacttacctaagcgaggtattggagatcgcgcgctagaggaagttgaaatcttcgccgaa
gctcagggaatctctttctggaatgcgctgctgcgagtatcagaggcgacatctgttcct
aataaggcagcgcaatccatcgcctcctttacctcaatgctgattgcgctgcagacactg
gttgaagcaaagacaaagccatctgtgattatcgaagcagtccttgaacagtcagggttg
ctgacagagcttgaagcaagtaaagacccacaagatgaagtgcgcgttgagaacttgaag
gaacttgtctctgcatccatggaatatgaagagcgcccctttgaagaacttggtgaagat
gaagagatttcactctctgggtttttggagaaggtatcccttgttgctgatgctgatgag
attcctgatggagaagatcacgggggagttgtcacactgatgactctgcatactgcaaag
ggtcttgaatttcccacagtctttctcacaggtatggaagatggaatcttccctcatgcg
cgaacactcgatgatcccaaacagattgaagaagaacgtcgccttgcatatgttggatta
acgcgcgcagaaaagcgtctctatatttcacgcgctgaatatcgtttaacttttggaaca
ccgaaatacaatccaggttctcgattccttgatgagatcccatctgaattgatcgaatgg
aagaatgaaggtcgcagcacatttacaacatcttctgctgtgaagaaatctcgtcttcca
tctggtccaccaccacgagctacgggcaagaaatcaaccgcgatggttcttgaagtggga
cagcgtgtgtcacatgacacattcggattagggactgtggtggcacttgctggagaaggc
gataaatcagaggcgaccatcaacttcggccaatatggcgataagcgcttattgctgcgc
tatgcccctgtcacaactctttaa
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