Candidatus Planktophila dulcis: A1s21155_06095
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Entry
A1s21155_06095 CDS
T05051
Name
(GenBank) DNA excision repair protein ERCC-3
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
plak
Candidatus Planktophila dulcis
Pathway
plak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plak00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
A1s21155_06095
09124 Replication and repair
03420 Nucleotide excision repair
A1s21155_06095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plak03021
]
A1s21155_06095
03400 DNA repair and recombination proteins [BR:
plak03400
]
A1s21155_06095
Enzymes [BR:
plak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A1s21155_06095
Transcription machinery [BR:
plak03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
A1s21155_06095
DNA repair and recombination proteins [BR:
plak03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
A1s21155_06095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
YdgH_BhsA-like
IMD
DUF7811
Motif
Other DBs
NCBI-ProteinID:
ASY12500
UniProt:
A0AAD0E693
LinkDB
All DBs
Position
1179390..1181039
Genome browser
AA seq
549 aa
AA seq
DB search
MTDGPLIVQSDKTLLLDVDHVLSTECRRAIAPFAELERSPEHIHTYRLTNLGLWNARAAG
HDAELVIDTLIKYSRYAVPHSLLVDVAETMSRYGRLRLEADPVHGLILVTTDTGVLEEVI
RAKKIAPLLGVRIDKETIAVHPSQRGQIKQSLLRLGWPAEDFAGYVDGQAHDIALKQDGW
KIRQYQEHAAEGFWHGGSGVVVLPCGAGKTIVGAAAMAHAKATTLILVTNTIAARQWREE
LLKRTTLLDDEIGEYSGAKKEIRPVTIATYQVMTKKKNGVYAHLDLFDTHDWGLIIYDEV
HLLPAPIFRFTADIQSRRRLGLTATLVREDGMEGEVFSLIGPKRFDVPWKEIEAQGYIAP
AECIEVRVNLTEAERLSYATAEPEERYRYCATTRTKRNVVEELVAHHAGEQVLVIGQYID
QLDDLSETLGVPLIKGDTPQKERERLFAAFRTGEVTCLVVSKVANFSVDLPEATIAIQVS
GAFGSRQEEAQRLGRILRPKADGRGAKFYSVVSRDTIDQDFAQNRQRFLAEQGYSYRIID
ADDVFQGKF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatggaccactgattgtccagagcgataaaactcttcttctcgatgtagatcac
gttctctccactgaatgccgccgcgcaattgcaccctttgctgaacttgaacgttctcca
gaacatatccacacatatcgcctgacaaatctaggactttggaatgcacgtgctgcaggc
catgatgcagagctcgtcatcgatactcttattaagtattccaggtatgcagtcccacat
tcattactcgtcgatgttgcagagacaatgtctcgttatggtcgtcttcgccttgaagca
gatcctgtgcatggactcatccttgttacaactgacacaggcgtactggaagaagtaatc
cgagcaaagaagattgctccgcttcttggagttcgcattgataaagaaacgattgctgtt
cacccaagtcaacgtggacagattaagcaatcacttcttcgtcttggttggccagcagaa
gattttgcaggctatgttgatggccaagcacatgacattgcactgaaacaagatggatgg
aagattcgccaatatcaagagcatgctgctgaaggattctggcatggtggctctggtgtt
gttgtgcttccatgtggtgctggaaagaccattgttggtgcagccgcaatggcacatgcc
aaggcaacaaccttgattcttgtgacaaatacaattgctgctcgtcaatggcgtgaagag
ctactcaagcgcacaacacttctcgatgatgagatcggtgaatattcaggagcgaagaaa
gagattcgccctgtcactattgctacataccaagtgatgacgaagaagaagaatggtgtc
tatgcccatttagatctcttcgatactcatgactgggggctgattatttatgatgaggta
cacctacttcccgctcccatcttccgctttactgcagatatccaatctcgtcgtcgctta
ggcctgacagcaacacttgtgcgcgaagatggaatggaaggtgaagtcttctcacttatt
ggtccaaagagatttgatgtgccatggaaagagattgaggcgcagggatatatcgcacct
gctgaatgtattgaagtgcgcgtaaacctgacagaggcagaacgtctgtcttatgcaact
gcggaacctgaagaacgctatcgatactgcgcaactactcgcaccaagcgcaatgttgtg
gaagaacttgtcgctcaccatgcgggagaacaagtacttgttattgggcaatacattgat
caactcgatgatctctctgaaactctcggtgttccactcattaagggcgatacgccacag
aaagagcgcgaacgactctttgcagcatttcgcacaggtgaagtcacatgcctagttgtt
tccaaagttgccaacttctctgtcgatcttcctgaagccacgattgcaattcaggtatca
ggtgcatttggctcacgccaagaagaagcacaacgcctcggacgcatcttgcgacctaag
gcagatgggcgcggagctaagttctactctgttgtctcacgtgacactatcgatcaagat
tttgcacagaaccgtcagcgcttcttagccgaacagggttactcctacagaattattgat
gccgacgatgtttttcaagggaagttctaa
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