Metapseudomonas lalkuanensis: FXN65_00440
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Entry
FXN65_00440 CDS
T07120
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
plal
Metapseudomonas lalkuanensis
Pathway
plal03030
DNA replication
plal03410
Base excision repair
plal03420
Nucleotide excision repair
plal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FXN65_00440 (polA)
03410 Base excision repair
FXN65_00440 (polA)
03420 Nucleotide excision repair
FXN65_00440 (polA)
03440 Homologous recombination
FXN65_00440 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plal03032
]
FXN65_00440 (polA)
03400 DNA repair and recombination proteins [BR:
plal03400
]
FXN65_00440 (polA)
Enzymes [BR:
plal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FXN65_00440 (polA)
DNA replication proteins [BR:
plal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FXN65_00440 (polA)
DNA repair and recombination proteins [BR:
plal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FXN65_00440 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FXN65_00440 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
QEY60582
UniProt:
A0A5J6QGG1
LinkDB
All DBs
Position
86050..88797
Genome browser
AA seq
915 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSAGLPTGAVKGVLNMLRSLRRQFPDSPFAVVFD
AKGGTFRDEMFAEYKANRPSMPDELRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLAR
QSAAGGRPVVISTGDKDMAQLVDGHITLVNTMTGSTLDVDGVKEKFGVGPELIIDYLALM
GDKVDNIPGVPGIGEKTALGLLTGVGGGLDVLYSSLDKVPALPIRGAKGLPAKLEEHKDM
AYLSYKLATIKCDVELNVEIDALHPGEPDREALAELYRTLEFKTWLDDLQRQAKSDGEQL
ELVEAAPAEAEARYEIILEQAQFDAWLKKLEAAPLFAFDTETTSIDAQQAQVVGVSFAVE
AGEAAYVPLAHSYMGVPAQLDRDAVLKALKPLLEDPNKAKVGQHAKYDMNVLANATTPIA
VQGIAFDTMLESYVLDATATRHDMDSLSLKYLGHSTIRFEDIAGKGAKQLTFDQIAIEQA
GPYAAEDADVTLRLHQTLWQKLEAIPSLAKVLKEIEMPLVPVLARIERNGAFVDGKLLGQ
QSLELGEKMVALERQAYDLAGQEFNLGSPKQLGAILYEKLGLPVLAKTATGQPSTAENVL
ADLAEQDYELPKVIMQYRSLSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAATGRLSSTD
PNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLDAFRHDRDV
HRATASEVFGVPLDEVTPNQRRSAKAINFGLIYGMSAFGLAKQIGVERKEAQAYIDRYFA
RYPGVLAYMERTREQAAQQGFVETLFGRRLYLPEIHSKNQAMRKGAERTAINAPMQGTAA
DIMKRAMVAVDNWLQESGLDVRVILQVHDELVLEVREDLVDQVSEQIRPLMSGAAELDVP
LVVEVGVGDNWDEAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggatcctcctacctgtaccgcgccttccat
gccctgccgccactgaccacctcggccggcctgcccacgggcgcggtcaaaggcgtgctg
aacatgctcaggagcctgcgccggcagttccctgacagccccttcgcggtagtcttcgac
gccaagggcggcaccttccgcgatgaaatgttcgccgagtacaaggccaatcgcccctcg
atgccggatgagctgcgcgttcaggtggagccgttgcatgccagcgtgcgcgcactgggg
ctgccgctgctctgtgtggagggcgtggaagccgacgacgtgatcggcaccctggcccgg
cagagtgcggcgggcgggcgtccggtggtgatctccaccggcgacaaggacatggcgcag
ttggtcgacgggcacattacgctggtcaacaccatgaccggtagcacgctggacgtggat
ggcgtgaaggagaaattcggtgtcggtcctgagctcatcatcgactacctggcgctgatg
ggggacaaggtggacaacatccccggcgtgcccggcatcggcgagaagaccgccctcggc
ctgctcaccggcgtaggggggggcctggacgtcctctattccagcctggacaaggtgccc
gccctgccgatccgcggcgccaagggcctgccggccaagctcgaagagcacaaggacatg
gcctacctgtcctacaagctggcgaccatcaagtgcgacgtggagctgaacgtcgagatc
gacgccctgcaccccggcgaacccgaccgggaggccctggccgagctgtatcgcaccctg
gaattcaagacctggctggacgacctgcagcgccaggccaagtccgacggcgagcagctg
gagctcgtcgaagccgcgcccgccgaggccgaggcgcgctacgagatcatcctggagcag
gcgcagttcgatgcctggctgaagaagctggaggccgccccgctgttcgccttcgacacc
gaaaccaccagcatcgacgcccagcaggcgcaggtggtgggcgtgtccttcgccgtggaa
gccggtgaagccgcctacgtgcccctggcccacagctatatgggcgtaccggcgcagctt
gaccgcgacgccgtgctcaaggccctcaagccgctgctggaagacccgaacaaggccaag
gtcggccagcatgccaagtacgacatgaacgtcctggccaatgccacgacacccatcgcc
gtgcagggcatcgccttcgacaccatgctcgaatcctacgtgctggatgccactgccacg
cgccacgacatggacagcctgtccctcaagtacctggggcatagcaccatccgtttcgag
gacatcgccggcaagggcgcgaagcagctgacgttcgaccagatcgccatcgagcaggcc
ggcccctacgccgccgaagatgcggacgtcaccctgcgcctgcaccagaccctgtggcag
aagctggaggcgatcccgtccctggccaaggtgctgaaggagatcgagatgccgctggta
ccggtccttgcgcgtatcgagcgaaacggtgctttcgtcgacggcaagttgctgggccag
cagagcctggaactgggcgagaagatggtggcgctggagcgccaggcctacgatctggcc
ggccaggagttcaacctcggctcgcccaagcagcttggcgccatcctctatgaaaagctc
ggcctgccggtgctggccaagactgcgaccggccagccttccaccgccgagaacgtgctc
gccgacctcgccgagcaggattacgagctgcccaaggtgatcatgcagtaccgctccctg
agcaagctcaagagcacctacaccgacagactgccggagcagatcaacccgcgcaccggg
cgtatccacacctcctaccaccaggcggtggcggctaccgggcgcctgtcgtccaccgat
ccgaacctgcagaacatcccgatccgcaccgccgagggccggcgcatccgccaggccttc
gtcgcgcccaagggctacaagctcctggcggcggactattcgcagatcgagctgcgcatc
atggcccacctggccaaggatgaaggcctgctggacgccttccgccatgaccgcgacgtg
caccgtgccaccgcttccgaggtgttcggcgtaccgctggacgaggtaaccccgaaccag
cgccgtagcgccaaggcgatcaacttcggcctgatctatggcatgagcgccttcggcctg
gccaagcagatcggcgtcgagcgcaaggaagcccaggcttacatcgaccgctacttcgcc
cgctatccgggtgtgctggcctatatggagcgcacccgcgagcaggctgcgcagcagggc
ttcgtcgaaaccctgttcggtcgccggctgtacctgccggaaatccactcgaagaaccag
gccatgcgcaagggcgccgagcgcaccgcgatcaacgcgccgatgcagggcaccgcggcg
gacatcatgaagcgcgccatggtagctgtggataactggctgcaggaaagcggcctggac
gtccgcgtcatcctccaggtgcacgacgaactggtgctcgaagtgcgcgaggacttggtg
gatcaggtatccgagcagattcgtccgctcatgagcggtgccgccgaactggatgtgccg
ctggtagtggaagtgggtgtgggtgacaactgggatgaggcgcactga
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