Metapseudomonas lalkuanensis: FXN65_00580
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Entry
FXN65_00580 CDS
T07120
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
plal
Metapseudomonas lalkuanensis
Pathway
plal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FXN65_00580 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plal03400
]
FXN65_00580 (recB)
Enzymes [BR:
plal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FXN65_00580 (recB)
DNA repair and recombination proteins [BR:
plal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FXN65_00580 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
ResIII
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QEY60610
UniProt:
A0A5J6QDG4
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All DBs
Position
121339..124866
Genome browser
AA seq
1175 aa
AA seq
DB search
MSLDLLKDPFTGRSLIEASAGTGKTWTLTALYARLLLERQLGVGQILVVTYTTAATAELR
ERIRARLAALLAMYEGAPAADPVLAGLHAQYPGEDAHRRLLLAVHGFDEAAIFTIHGFCQ
RALQDAAFEAGGDFDSELSTDDREVLDALLADLWRRELADAEPAWARFLAQKRITPAWLR
QRLRSHLGKPYLRVEPRDLKAGDLSAASEAWSHAQSFWQRLGSECVAQLAQLDSLNKRSY
DAAKFALWQTELDAYFADPAALFAPPTGLEKLGTEALAKATRKGFDAPDHAVCAALQGLF
DALQEAVPAGEERLIDLQVRLLQTLNRELPARKAAQRLLAFDDLLNRLDDALRGPAGEAL
GQALRERYPVALIDEFQDTDPVQYAIFHRVYEHQGDLCFVGDPKQAIYAFRGADLATYLK
ARDEAARQYSLDTNHRSTPQLIAALNQVFDRPLPFAEPGLDYPPVGASSKARAHLVLPET
GAPLELVWLGDEPIGKGDAGRAVASDTARRIAGLLAASARGEAYFDEDGVRSPLKGGDIA
VLVASHRQAGDVAAELAARGVPSVRRGRDSVWHSEEAEELAAVLAAYAEPGREGVLRYAL
STRLLGRDAQQLARCQDDEHAWDEERENAERYHQLWQQQGFMRAFRAWLDEQGVAERLIA
LPDGERRLTNLLHLAELLQTESLQRPGLEPLLAWFNAQRVAESHGDDALLRLESDAERVQ
IVTVHTSKGLEYPLVFCPYLWDGALLRRDEDITCHAEDGTPLLDLGGEHLDEHRAVARRE
RFAERLRLAYVALTRARDRLWIHWGPVALPKAKKDGELPEDGLHSCALAWLLHGRELDEA
DVLGALAHHMAVRDGAALRAELEALAGASRGQIAVVPPQVEEANAQGESRALPPAGLATL
ERTLASAWRVGSFSGLAAGMHMEAPDRDGLVVPPATEPGSGFFAFPRGARAGTCLHAVLE
DWMRGEGELPALVQKHLQGHGLPDSWVEIASDHLQRVLDTDLDGRGLRLSALAANRRLPE
LGFTFPVAGLDVGRLRAILADPAHGLPEVMRVAAERLEFDTLKGFMKGFIDLTFEHDGRW
YIADYKSNWLGPDASYYGGERLEQAIAAEHYHLQYLIYLVALRRFLRQRLDGFASGQLGG
AWYLFLRGMPDSGVFFHRPADSLLDALDLLFEEGR
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgacctgctcaaggaccccttcaccggccgcagcctgatcgaggccagcgcc
ggcacgggcaagacctggaccctcaccgccctgtacgcgcgcctgttgctggaacgccag
ctgggtgtcgggcagatcctcgtggtgacctacaccacggcggctaccgccgagttgcgc
gagcgcatccgtgcccgtctggcagccttgctggccatgtacgaaggcgctccggcagcc
gatccggtactggccggattgcatgcgcagtacccgggcgaggacgcccatcgccgtctg
ttgctggccgtccacggattcgacgaggcggccatcttcaccatccacggcttctgccag
cgcgccctgcaggacgccgccttcgaagccggcggagatttcgacagtgagctgtccacc
gacgaccgcgaagtgctggacgcgctgctcgccgacctctggcggcgcgagctggcggac
gcagaaccggcctgggcgcgtttcctggcgcagaaacgcatcacgccggcctggttgcgc
cagcgcctgcgttcgcacctgggcaagccgtacctgcgtgtcgagccccgtgacctgaaa
gcgggagacctgtccgccgccagcgaagcctggagccatgcccagagcttctggcagcgc
ctgggcagcgagtgcgtggcccagcttgcgcagctcgacagcctcaacaagcgcagttac
gacgccgccaagttcgccctgtggcaaaccgaactggatgcctacttcgccgatccggct
gccctcttcgccccgccgaccggattggaaaagctgggcaccgaggccttggccaaggcc
acccggaagggcttcgatgcgccggatcacgcggtctgcgccgcgctgcagggcctcttc
gacgccttgcaggaagctgttccagccggtgaggagcgcctgatcgacctgcaggtgcgc
ctgctgcagaccctcaaccgcgagttgccggcccgcaaggcggcccagcgcctgctggcc
ttcgacgatctgctcaaccgcctcgacgatgccttgcgcggtccggccggcgaagccctc
ggccaggccctgcgcgagcgctatccggtggcgctgatcgacgaattccaggacaccgac
ccggtgcagtacgccatcttccaccgggtgtacgagcaccagggagacctttgcttcgtc
ggtgatcccaagcaggccatctacgccttccgtggcgccgacctcgccacctacctcaag
gcccgcgacgaggccgcgcggcagtacagcctggacaccaaccaccgctccacgccgcag
ctgatcgccgccctcaaccaggtgttcgaccgacccctgccctttgccgagcccggactg
gactacccaccggtgggcgccagcagcaaggctcgtgcgcacctggtgctgcccgaaacc
ggtgcgccgctggagctggtgtggctgggggacgagccgatcggcaagggcgatgcgggg
cgcgcggtggccagcgataccgcgcgacgcatcgctggcctcctggctgccagtgcccgt
ggtgaagcctatttcgacgaagatggcgtacgttcgcccctcaagggtggggacatcgcc
gtgctggtggccagccaccgccaggccggtgatgtcgccgccgaactcgccgcccgtggc
gtacccagcgtacgccgggggcgggacagcgtctggcacagcgaagaggccgaggaactg
gcggcagtgctcgccgcctatgccgaacccggtcgcgaaggtgtgctgcgctacgccctg
tccactcgcctgctgggccgcgatgcccagcaactggcgcgctgccaggacgacgagcac
gcctgggacgaggagcgcgagaacgccgagcgctatcatcagctctggcagcagcaaggc
ttcatgcgtgccttccgcgcctggctcgatgagcagggcgtggccgaacgcctgatcgcc
ctgcccgacggcgagcggcgcctgaccaacctcctccacctggccgaactgttgcagacc
gaaagtctccagcgccccggactggagccgcttctggcctggttcaacgcccagcgcgtc
gccgagagccatggcgacgatgccctgctgcgcctggagagcgatgccgaacgggtgcag
atcgtcaccgtgcacaccagcaagggtctggagtacccgctggtgttctgcccctacctc
tgggacggcgccctgctgcgccgcgatgaggacatcacctgccacgccgaggacggcacg
ccgctgctggaccttggtggcgagcacctcgacgagcaccgcgccgtggcccgccgcgag
cgcttcgccgagcgtctgcgcctggcctacgtggcgctgacccgtgctcgcgaccgcctg
tggatccattgggggccagtggccctgcccaaggcgaagaaggacggcgagctgccggaa
gacggcctgcacagctgcgccctcgcctggttgctgcacggccgcgaactggacgaggcc
gacgtgctcggcgccctcgcccaccatatggccgtccgggatggcgcggccctgcgcgcc
gagctcgaagccctggccggagccagccggggccagatcgccgtggtgccgccccaggtc
gaggaagccaatgcgcagggcgagtcccgtgccctgccgccggccggactggcgaccctg
gagcgcaccctggccagcgcctggcgggtgggcagcttctccggcctggctgctggtatg
cacatggaagcacccgaccgcgatggcctggtggtgccgccggccaccgaaccgggcagc
ggcttcttcgcctttccccgtggcgcccgggccggtacctgcctgcacgccgtgctggag
gactggatgcgtggcgaaggcgagctgccggcgctggtgcagaagcatctgcagggccac
ggcctgcccgatagctgggtggagatcgccagcgaccatctgcagcgggtgctggatacc
gacctggacggccggggcctgcgcctgtcggcccttgccgccaatcgccgcttgccggag
ctgggcttcaccttccccgtggccgggctggatgtggggcgcctgcgggcgatcctcgcc
gaccccgcccatggcctgccggaagtgatgcgcgtggctgccgagcgcctggagttcgat
accctcaagggcttcatgaagggcttcatcgacctgaccttcgagcacgacgggcgctgg
tacatcgctgactacaagtccaactggctcggcccggatgccagttactatggcggcgag
cgcctggagcaggccatcgccgccgagcactaccacctgcagtacctgatctacctggtg
gcgctgcggcgcttcctgcgccagcggctggatggtttcgccagcgggcagctcggcggc
gcctggtacctgttcctgcgcggcatgccggattccggggtgttcttccatcgtcccgcc
gacagcctgctggatgcgctggacctgctgttcgaggagggccgctga
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