Metapseudomonas lalkuanensis: FXN65_00585
Help
Entry
FXN65_00585 CDS
T07120
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
plal
Metapseudomonas lalkuanensis
Pathway
plal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FXN65_00585 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plal03400
]
FXN65_00585 (recD)
Enzymes [BR:
plal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FXN65_00585 (recD)
DNA repair and recombination proteins [BR:
plal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FXN65_00585 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
Helicase_RecD
AAA_22
SLFN-g3_helicase
UvrD_C
AAA_16
nSTAND3
AAA_28
CbiA
DEAD
T2SSE
Terminase_6N
Flavi_DEAD
AAA_5
AAA
ATPase
Motif
Other DBs
NCBI-ProteinID:
QEY60611
UniProt:
A0A5J6QHE8
LinkDB
All DBs
Position
124866..126704
Genome browser
AA seq
612 aa
AA seq
DB search
MSLSDWSLGPLERHFTESLQRLEPQAPDAVLAAAALCCQALGAGDVCLPLARWAGQPLFV
EGGPGLQAPALPAWLAALQASALVAAPGGYAPLTLDGARLYLSRYHAYEAQLAENLLRRA
SARPEVDEAQLSESLARLFARNTQQPDWQRLAAAQAVRRNLAVISGGPGTGKTTTVVRLL
AALLEQPGGERLAIGLAAPTGKAAARMAEAIRNAKAELPVSDAIKAALPEEARTLHRLLG
SRGDTPQVRHHADNPLPLDVLVVDEASMVDLALMAKLLDALPPNARLILLGDKDQLAAVE
AGAVFAELCEGRGLDAAAAADLTRITGQTVPVEQPRSRLGDAVVLLTHSHRFAGDSGIGE
LARRINGGDARGTLELLRGGHPDLTWNAGPTPAALLERLESGYAPYFAAVRAADPASAFA
AFNGFRALTAQREGPWGVGGINEALEARIKRRLSVSSRERWYPGRAVMVRQNDYALGLFN
GDIGLCLSTPNGLRVFFEGDEGYRPFAPARLPSHDSAFAMTVHKSQGSEFTEVLLALPEQ
PSPLLSRALFYTGITRAKKKVEIWGLPARLTEAVSTRAERAAGLAERLGESAEVAPPAAL
PAPGDQDQLSLF
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtccgattggtccctggggccgctggaacgccatttcaccgagagcctgcag
cgcctcgagccgcaggcgcccgatgccgtgctggcggccgccgcgttgtgctgccaggcc
ctgggcgccggcgatgtctgcctgccgctggcacgttgggccgggcagccattgttcgtc
gagggcggtcccggcctgcaggcccccgccctgcccgcctggctcgccgcgttgcaggca
tcggccctggtggctgcgcccggcggttatgcgccgttgaccctggacggcgcccgcctc
tacctcagccgctaccacgcctacgaggcgcagttggcggagaacctgttgcggcgggca
tccgcccggccggaggtggacgaggcgcagctcagcgaatccctggcgcggctgttcgcc
cgcaacacccagcaaccggactggcagcgcctggccgcagcccaggcggtgcgccgtaac
ctggccgtgatttccggcggcccgggtaccggcaagaccaccacagtggtgcgcctgctg
gcggcgctgctggagcagcccggtggtgagcggcttgccattggcctggccgcacctacc
gggaaggccgctgcgcgcatggccgaggccatccgtaacgccaaggccgaactgccggtg
agcgacgccatcaaggccgcgctgcccgaggaggcgcgcaccctgcaccgcttgctgggc
agccgtggcgacacccctcaggtgcgccatcatgccgacaatccgttgccgttggacgtg
ctggtggtggacgaagcgtccatggtcgacctggcgctgatggccaagctgctggacgcc
ctgccgcccaatgcacgactgatcctgctgggcgacaaggatcagctggcggcggtggag
gctggcgcggtgttcgccgaactctgcgaaggccgtggcctggacgctgccgccgccgct
gacctgacgcgcatcacgggccagaccgtgcccgtggagcagccccgttcgcgcctcggc
gatgccgtggtgctgctgacccacagccaccgctttgccggcgacagcggcatcggcgag
ctggcgcggcgcatcaatggcggcgacgcccgtggcaccctggagctgctgcgtggtggt
catccggacctgacctggaacgccggccccaccccggctgccctgctggagcggctggaa
tcgggctatgcgccctacttcgctgccgtgcgcgccgcagaccccgcctcggccttcgcc
gcgttcaacggtttccgcgccctgaccgcccagcgcgaagggccctggggcgtgggtggt
atcaacgaagccctggaggcgcgtatcaagcgccgcctgagtgtgtccagccgcgagcgc
tggtatcccggccgggcggtgatggtgcgccagaacgactacgccctcggcctgttcaac
ggcgatatcggcctttgtctgtccacgcccaacgggttgcgggtcttcttcgagggtgac
gagggttatcggcctttcgccccggcgcgcctgcccagccacgacagcgccttcgccatg
accgtgcacaagagccagggctcggagttcaccgaagtgctgctggccctgccggaacag
cccagcccgttgctcagccgtgcgttgttctacaccggcatcacccgggccaagaaaaag
gtggagatctggggtttgccggcgcgcctgaccgaagcggtatcgacccgcgccgagcgt
gctgccgggctggcggaaaggctgggcgagtcggcggaggtcgcccctccggccgcgctg
ccagcaccaggggaccaggatcaactgagcctgttctga
DBGET
integrated database retrieval system
