Metapseudomonas lalkuanensis: FXN65_03085
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Entry
FXN65_03085 CDS
T07120
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
plal
Metapseudomonas lalkuanensis
Pathway
plal02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FXN65_03085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plal03021
]
FXN65_03085
Transcription machinery [BR:
plal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FXN65_03085
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
PhyR_sigma-like
Sigma70_r4
HTH_23
Xre-like-HTH
HTH_24
HTH_29
HTH_Tnp_4
GerE
Motif
Other DBs
NCBI-ProteinID:
QEY61074
UniProt:
A0A5J6QEQ1
LinkDB
All DBs
Position
complement(648771..649271)
Genome browser
AA seq
166 aa
AA seq
DB search
MSSPPISLQALYSEHHGWLKNWLRSKLGNAADAADLAQDTFLRLLGKGGSLELRTPRAFL
RTVARGLVIDHWRREELERAYLEALAQLPEAEAPSLEERELILELLERIALMLDRLKPKA
RAAFLLAQCEGLTHQDVATRMGISLRSVERYVADALYHCYLLRFEE
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctcccccgatttccctccaggcgctgtacagcgagcaccacggctggctgaag
aactggctgcgcagcaagctgggcaatgccgccgatgcggcggacctggcccaggacacc
ttcctgcgcctgctgggcaagggcgggagccttgaactgcgcacaccgcgcgccttcctg
cgcaccgtggcgcggggcctggtgatcgaccactggcgccgcgaggaactggagcgcgcc
tacctggaagccctggcgcaactgcctgaagccgaggcgccctccctcgaggaacgcgag
ctgatccttgaactgctggagcgcatcgcactgatgctcgaccggctcaagcccaaggca
cgtgctgccttcctgctcgcccagtgcgaaggcctcacccaccaggacgtcgccacgcgc
atgggcatctccctgcgctcggtggagcgctatgtggccgacgccctctatcactgctac
ctgctgcggttcgaagaatga
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