Metapseudomonas lalkuanensis: FXN65_07730
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Entry
FXN65_07730 CDS
T07120
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
plal
Metapseudomonas lalkuanensis
Brite
KEGG Orthology (KO) [BR:
plal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plal03009
]
FXN65_07730
Enzymes [BR:
plal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FXN65_07730
Ribosome biogenesis [BR:
plal03009
]
Prokaryotic type
rRNA helicases
FXN65_07730
BRITE hierarchy
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Vir_act_alpha_C
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QEY61960
UniProt:
A0A5J6QHE3
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All DBs
Position
1616252..1617583
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AA seq
443 aa
AA seq
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MFSQFALHERLLKAVAELKFVEPTPVQVAAIPPALEGRDLRVTAQTGSGKTAAFVLPLLN
RLIGEAKPRERIRSLILLPTRELAQQTLKEVERFSQFTFIKSGIVTGGEDFKVQAAMLRK
LPDVLVATPGRLIEHLNAGTVDLREVEVLVLDEADRMLDMGFAEDMQRITELCANRQQTL
LFSATTGGAALREVSANVLRDPLHLRLNSVDQLNESTRQQIITADHAEHKEELARWLLAN
ETYQKAIIFTNTRAQADRLYGHLVAGGYKAFVLHGDKDQKDRKLAIERVKQGGTKVLVAT
DVAARGLDIEGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLICHNDWNLMSSIER
YLKQSFERRTIKELKGTYTGPKKVKASGKAAGAKKKKTDKKGDKKAPAKAAAPKRKPSKP
REESRVVSTDGLAPLKRKKPAAE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcatgaacgtctgctcaaggccgttgccgaactcaaattc
gtcgagccgaccccggtgcaggtggcggccattccgccggccctggaagggcgcgacctg
cgggtgaccgcccagaccggcagcggcaagaccgccgccttcgtcctgccgctgctgaac
cgcctgattggcgaggccaagccccgtgagcgcatccgctcgctgatcctgctgccgacc
cgcgagttggcgcagcagaccctgaaagaggtggagcgcttttcccaattcaccttcatc
aagtccggcatcgtcaccggcggggaagacttcaaggtgcaggcagcgatgctgcgcaag
ctgcccgacgtgctggtcgccacgccgggccgcctgatcgagcacctgaacgccggcacc
gtggacctgcgcgaggtggaagtgctggtgctggacgaggccgaccgcatgctcgacatg
gggtttgccgaggacatgcagcgcatcaccgaactctgcgccaaccgccagcagaccctg
ctgttctccgccaccaccggaggcgccgcgctgcgcgaggtttccgccaatgtgctgcgt
gacccgctgcatctgcgcctgaacagcgtcgatcagctcaacgagagcacccgccagcag
atcatcacggccgaccacgccgagcacaaggaggagctggcgcgctggctgctggccaac
gagacctaccagaaggcgatcatcttcaccaacacccgcgcccaggccgatcggctgtac
gggcatctggtggcgggcggctacaaggcgttcgtgctccacggcgacaaggaccagaag
gaccgcaagctggccatcgagcgtgtgaagcagggcggtaccaaggtgctggtggccacc
gatgtcgccgcccgtggcctggacatcgagggcctggacctggtgatcaatttcgacatg
ccgcgctccggcgatgagtatgtgcaccgtgtcggccgcaccggccgtgccggtggcgaa
ggcctggcgatctcgctgatctgccacaacgactggaacctgatgtccagtatcgagcgc
tacctgaagcagagcttcgagcgccggaccatcaaggagctcaagggcacctacaccggt
ccgaagaaggtcaaggcttccggcaaggccgctggcgccaagaagaaaaagaccgacaag
aaaggcgacaagaaggctccggccaaggccgccgcgcccaagcgcaagccgagcaagccg
cgtgaggagtcccgcgtggtgagcaccgacggcctggcgccgctcaagcgcaagaagccg
gcggcggaatga
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