Metapseudomonas lalkuanensis: FXN65_09060
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Entry
FXN65_09060 CDS
T07120
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
plal
Metapseudomonas lalkuanensis
Pathway
plal03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plal00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FXN65_09060
09124 Replication and repair
03420 Nucleotide excision repair
FXN65_09060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plal03021
]
FXN65_09060
03036 Chromosome and associated proteins [BR:
plal03036
]
FXN65_09060
03400 DNA repair and recombination proteins [BR:
plal03400
]
FXN65_09060
Enzymes [BR:
plal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
FXN65_09060
Transcription machinery [BR:
plal03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FXN65_09060
Chromosome and associated proteins [BR:
plal03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
FXN65_09060
DNA repair and recombination proteins [BR:
plal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FXN65_09060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QEY62215
UniProt:
A0A5J6QK98
LinkDB
All DBs
Position
complement(1921194..1923443)
Genome browser
AA seq
749 aa
AA seq
DB search
MTYSVAVRALCEFTAKGGDLDLRFTPAPTAQEGIVGHALVAARRGEGYQTEVALSGEYGP
LRVRGRADGYDPALTRLEEVKTYRGDLQRMPDNHRQLHWAQVKVYGWLLCQQNGLSEIEL
ALVYFDIGSQKETLLTERHRAEDLRQFFEEQCLRFIAWAEQELAHAGARNTALEALGFPH
AQFRHGQRQLAEAVYKAVSTGCCLMAQAPTGIGKTLGTLFPLLKAVPRQGLDKVFFLAAK
TPGRQLALDALAQTRAEPLRVLELVARDKACEHPENACHGESCPLARGFYERLPAARKAA
AERRWLDREAIREVALAHQVCPYYLAQEMARWSDVVVGDYNYYFDSSALLHGLASANQWR
VAVLVDEAHNLVERARKMYSAELDQLSLKALRKAAPTVLKKPLERVGRAWSELNKEQVED
YRAYDAPPQKLLNALQGAVVAITDYLTDNPTAMDVALQDFYFGAMQFGRMAEQFDRHSLF
DIGKRPGKAGSSLSRLCLRNLVPATFLAPRFAASRSTVLFSATLNPSRYYSDLLGLAHNT
PWLEVDSPFRTDQLQVRVAANVSTRYRHRSASLGPIAELMARQFTERPGNYLAFFSSYDY
LQQAAERFAREHPQVPIWLQGRQMDEAARQAFIQRFEAGGRGIGFAVLGGAFGEGIDLPG
ERLIGAFVATLGLPQLNAVNEQLKLRMGTLFGAGYDYTYLYPGMQKVVQAAGRVIRTTED
RGVVHLIDDRFARPEVQRLLPSWWSIDSL
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgacgtatagcgtcgccgtgcgcgcgctctgcgagttcaccgccaagggcggcgacctc
gacctgcgtttcaccccggcccccaccgcacaggaaggcatcgtcggtcacgccctggta
gccgctcgccgcggcgagggctaccagacggaagtcgccctgagcggtgagtacgggccg
ttgcgtgttcgcggccgcgccgacggctatgacccggcgctgacgcgcctggaagaagtg
aagacctaccgtggtgatctccagcgcatgccggacaaccatcggcagcttcactgggca
caggtgaaggtctatggctggctgctctgtcagcagaacggcctgtcggagatcgaactg
gcactggtgtatttcgacatcggcagccagaaagaaaccctgctcaccgagcgtcatcga
gcagaagacttgcgccagttcttcgaagagcagtgcctgcgcttcattgcctgggccgaa
caggaactcgcccacgccggtgcacgcaacaccgccctcgaagccctcggcttcccccac
gcgcagttccgccacggccagcgccagctcgccgaagcggtgtacaaggccgtcagcacc
ggctgctgcctgatggcccaggcgcccaccggcatcggcaagaccctgggcacgttgttc
cccctgctcaaggccgtgccgcgccaggggctggacaaggtcttcttcctcgccgcgaaa
acacccggtcggcaattggccctggatgctctggcgcaaacccgtgcagagccgctgcga
gtgctggaactggtggcccgcgacaaggcctgcgagcacccggaaaacgcctgccacggc
gagtcctgcccactggcccgaggcttctacgaacgcctgcctgccgcccgcaaggcggca
gcggaacgccgctggctggaccgcgaagccattcgcgaggtcgccctcgcccatcaggtc
tgcccgtactacctggcccaggaaatggcacgctggagcgacgtggtggtgggtgactac
aactactacttcgactccagtgccctgctccacggcctggccagcgccaaccagtggcgc
gtggcggtgctggtggacgaagcccacaacctcgtcgaacgggcacgcaagatgtactcg
gccgaactcgaccaactcagcctcaaagccctgcgcaaggctgcgccgacggttctgaag
aagcccctggagcgggtcggtcgcgcctggagcgagctgaacaaggagcaggtcgaggac
taccgcgcctacgacgcccctccacagaagctgttgaatgcgctgcagggcgcggtcgtg
gccatcaccgactacctcaccgacaaccccactgccatggacgtcgcgctgcaggacttc
tacttcggggccatgcagttcggtcgcatggccgagcagttcgacaggcattccctgttc
gatataggcaaacgccccggcaaggcgggcagcagcctgtcgcgcctgtgcctgcgcaac
ctcgtgccggccaccttcctcgccccacgcttcgccgccagccgctccaccgtgctgttc
tccgccaccctcaacccgagccgctactacagcgacctgctgggcctggcgcacaacacg
ccctggctggaagtggactcgcccttccgcaccgatcagcttcaggtacgggttgcggcc
aatgtatccacgcgctaccggcaccgcagcgcctcgcttggtcccatcgccgaactgatg
gcccggcaattcacggaacgcccgggaaactacctggccttcttcagcagctacgactat
ttgcagcaggcagccgagcgctttgcccgcgagcacccgcaggtgcccatctggttacag
gggcggcagatggacgaagccgcgcgccaggctttcatccagcgcttcgaggccggtggc
cggggaatcggtttcgccgtgctcggcggcgccttcggcgaaggcatcgacctgcccgga
gagcgccttatcggtgcctttgtcgccacccttggcctgccgcagctgaatgcggtgaac
gaacaactgaagctgcgcatgggcacgctgttcggcgccggctacgactacacctacctc
tatcccgggatgcagaaggtggtgcaggcggctggtcgggtcatccgcaccaccgaggac
cggggcgtggtgcacctgatcgacgaccgcttcgcgcggccggaggtccagcgactcctg
ccatcctggtggagcatcgattccctgtag
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