Metapseudomonas lalkuanensis: FXN65_16660
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Entry
FXN65_16660 CDS
T07120
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
plal
Metapseudomonas lalkuanensis
Brite
KEGG Orthology (KO) [BR:
plal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plal03016
]
FXN65_16660 (thpR)
Enzymes [BR:
plal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FXN65_16660 (thpR)
Transfer RNA biogenesis [BR:
plal03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FXN65_16660 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QEY63614
UniProt:
A0A5J6QM64
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All DBs
Position
3580102..3580632
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AA seq
176 aa
AA seq
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MSTPPLRLFFAIPCCPQLAHEIVDWRAQNPVEGKPVAPENLHLTLAFLGSQPRGQVEALA
ALAASLTPRTFILHLDRLARWKNGLLHLAPSQVPPALADLERSLREQLLISGFNLETRHF
KPHLTLARHCPRLPSTPTPTFDWPATEFALYASENTAKGTRYHALGHWPLRPPAPA
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgagcactccgccgctgcgcctgttcttcgccattccctgctgcccccaactggcccat
gagatcgttgattggcgcgcccagaacccggtcgaaggcaagccggtcgcgccggagaac
ctgcacctcaccctcgccttcctcggctcgcaaccccgcggccaggtggaagccctggca
gcactggccgcaagcctgacccccaggacattcatcctgcacctggaccgcctggcgcgc
tggaagaacggcttgctgcacctggccccgagccaggtcccgccagccctggccgacctg
gagcgcagcctccgcgagcagttgctgatctcgggcttcaacctggagacacgtcatttc
aaaccgcacctgaccctggcccggcactgcccaagactgccctcgactcccaccccaacc
tttgattggccggcgaccgaattcgccctctacgcctcggaaaacaccgccaaaggcacg
cgctaccacgccctcggacactggccattgcggcctccggccccagcctga
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