Metapseudomonas lalkuanensis: FXN65_17720
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Entry
FXN65_17720 CDS
T07120
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plal
Metapseudomonas lalkuanensis
Pathway
plal03420
Nucleotide excision repair
plal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FXN65_17720
03430 Mismatch repair
FXN65_17720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plal03400
]
FXN65_17720
Enzymes [BR:
plal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FXN65_17720
DNA repair and recombination proteins [BR:
plal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FXN65_17720
MMR (mismatch excision repair)
Other MMR factors
FXN65_17720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_16
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QEY63799
UniProt:
A0A5J6QST5
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All DBs
Position
complement(3797570..3799459)
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AA seq
629 aa
AA seq
DB search
MTSRAGKPDTPADIQLRDLLDADASTGFVMVSGAGSGKTTSIIKALDHLRKTRGLYLRQR
AKKIACITYTEVAVGEIWGDVGNDPLFHVSTIHSFLWAALKPFQADIASWVDRRLDQKIA
DTEAKVAAFTSRTHDKTRVQAAADIQRYREQKLRISSVDRFTYGVGSDYPKGILGHDDVI
RLSTELIRTLPLIAKVVGQRFPFVFVDESQDTAPDVVEAFKAISEELGSKFCLGFIGDPM
QKIYTAGAGAIEPLAGWKTIEKPENFRCPVAVLNVINNIRAGGDGLAQTGGKTELVGEER
QPVQGTAKLLIVPKDDRSGRLAAARQWLADRHADPLWLSDEPEADVKVLVIAHRMAASRL
GFGGLYEAFHDKTSDGLKDGFDDGSHWSIQPFLKFLMPLVLARGTGDHFEAMNLLRRFAP
SLQREHLRANALPSILKELDERVNALAESCGAISTVPAFEALRHLRDGGMFQLDDRLLTA
MAEYDPSVPHTEPGDAAALQKLLHTPLRELWGHRTYLEEQSPFATHQGVKGAEFSRVLTV
LDDEEGRHNQFSYGKLFGITPPSDNDRANLREGNETTFDRTRRLLYVCCSRAGKDLAVVF
FADDPAEAYAAIAGLGLFPAEDIHNFAAV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgactagccgtgcgggcaaaccggatacgccggccgatatccagcttcgggatcttctt
gatgctgacgcttcgacgggcttcgttatggtctcgggcgcgggctcggggaaaaccact
tcgatcatcaaggcgctggatcacctacgaaaaacgcgcggactctaccttcggcaacgg
gcaaagaagattgcctgcatcacctacaccgaggttgctgtcggtgagatatggggcgac
gtcgggaacgacccacttttccatgtttcgaccatccacagctttctctgggccgcccta
aaaccttttcaagcagacatcgcgagctgggtagatcgccggctcgatcagaagatcgcc
gacacagaggcgaaggtcgctgccttcacgagccggacgcatgataagacgcgggttcag
gctgctgccgacatccaacgctaccgtgaacagaagctgaggatctcctctgttgaccgt
ttcacctacggcgttgggagtgactacccgaaagggatcttggggcatgatgatgtaatc
agactgtccaccgaactcatccgcaccctgcctctcatcgccaaggttgttgggcagaga
ttcccgttcgtttttgtggacgaaagccaggacaccgctcccgatgtggtcgaggcgttc
aaggctatttcggaagagctgggttcgaagttctgcctcggcttcatcggcgatccaatg
cagaaaatttatacagctggagcgggcgcgattgagcctctcgccgggtggaaaaccatc
gaaaagccggaaaacttccgatgccctgtggccgtgctgaacgtcatcaataacatcagg
gccggtggagacggtctggctcagacaggcggcaagactgaactcgttggagaggagcga
cagcccgttcagggtacagcaaagcttcttatcgttcccaaagatgacaggagcgggcgt
ttggccgctgctcgccagtggctagctgatcgacatgccgatcccctctggctcagcgat
gagccggaggccgatgtgaaagtgctggtgatcgcgcaccgtatggccgccagtcgtctg
gggtttggaggcctctatgaggccttccacgacaaaacatctgatgggttgaaagacggg
ttcgatgatggctcgcattggtcgatacagccgttcctgaaatttttgatgccgctcgtc
ttggccagaggaactggcgatcacttcgaggcgatgaatctgttgcgtcgctttgctcct
tcgcttcagcgcgagcacctgcgcgcgaacgcgttgccgtcgatcctcaaggagctggat
gagcgggtaaatgcactcgccgagtcatgtggcgcgatctctaccgtccctgcgttcgag
gcgcttaggcatcttcgggatggcgggatgttccagctggatgatcgccttctaactgcg
atggctgaatacgatccatccgttccacatacggagcctggcgatgcagcagctttgcaa
aagttacttcacactccgttgagggaactctgggggcatcggacctatcttgaggaacag
tcgcccttcgcgactcatcagggagtcaagggggccgagttcagccgagtcctaacagtt
ctcgatgacgaggaaggtcgccacaaccaattctcatacgggaaactcttcggtattacg
ccgccatctgataacgatcgggccaatctgcgtgagggcaacgagactactttcgaccgt
acaaggcgccttctgtacgtatgctgctcgcgagccggaaaagatctggctgtggttttc
ttcgcggacgatccggcggaggcgtatgccgctatcgcgggtcttggactgttcccggcc
gaagacatccataatttcgcagccgtctga
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