Pseudomonas lalkuanensis: FXN65_21870
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Entry
FXN65_21870 CDS
T07120
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plal
Pseudomonas lalkuanensis
Pathway
plal03030
DNA replication
plal03430
Mismatch repair
plal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FXN65_21870 (dnaE)
03430 Mismatch repair
FXN65_21870 (dnaE)
03440 Homologous recombination
FXN65_21870 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plal03032
]
FXN65_21870 (dnaE)
03400 DNA repair and recombination proteins [BR:
plal03400
]
FXN65_21870 (dnaE)
Enzymes [BR:
plal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FXN65_21870 (dnaE)
DNA replication proteins [BR:
plal03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FXN65_21870 (dnaE)
DNA repair and recombination proteins [BR:
plal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FXN65_21870 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QEY64580
UniProt:
A0A5J6QPV9
LinkDB
All DBs
Position
complement(4730114..4733638)
Genome browser
AA seq
1174 aa
AA seq
DB search
MTASFVHLRLHSEYSLVDGLVRVKPLVKAVAGAGMPAVAITDQSNMCSLVKFYKTAMGGG
IKPICGADIWLDSPVEDGPLSRMTLLVMNAKGYRNLTELVSRGWSEGQSNGLVIIQRDWV
KEAAEGLIALSGAKEGEIGMALLSGDQVGAEALLAEWQAVFPDRFYLELQRTARVNDEEH
VHAAVALADRCGAPLVATNDVRFIKPDDFEAHETRVCIGEGRVLDDPRRPRNFSDQQYLK
SPAEMAELFADIPEALENTVEIAKRCNIEVQLGKHFLPDFPTPNGMSIDDYLRHASFEGL
EERLAVLLPKDTTPDYEEKRQAYIDRLEFELGTIIQMGFPGYFLIVADFIQWAKNNGVPV
GPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
ADKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEAAYNQE
EVLRDFLKTDEEAQEIWDMALKLEGITRGTGKHAGGVVIAPTKLTDFSPIACDEEGAGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEMINREQEKQGLPLVDIDRIPLDDKKTYD
MLQKAETTAVFQLESRGMKELIKKLKPDCLEDMIALVALFRPGPLQSGMVDDFINRKHGR
AELSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCSRNGIDPNLSGNIFDLVEKFAGYGFNKSHSAAYGWVSYQTAWLKAHF
PAPFMAAVLTADMHNTDKVVTLIEECRHMKLRIVAPDVNNSEYRFTVDDDGQIVYGLGAI
KGVGEGPVEAITECRAEGGPFKDLFDFCNRVDLKRINKRTLEALIRCGALDRLGPFFSNE
PKAYQAGIDTNRAVLLAAMEEAIQAAEQTARSHDSGHMDLFGGLFAEPEADVYANHRRAK
EMSLKERLKGEKDTLGLYLTGHPIDEYEGEVRRFARQRIVELKPARDTQIIAGLIVNLRV
MKNKKGDKMGFITLDDRSGRIEASLFADAFNAASGLLQTDAMVVVEGEVSHDDFSGGLRL
RAKRVLSLEEARTGLAESLRMKVDFSALQGDRLRWLAELCGRHRGSCPLTLDYSGNDAKA
LLQFGDDWRIAPADALIQALRDQFGRDNVFLHYR
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcttccttcgtccatctgcgtctgcattccgaatactccctggtagacggcctg
gtgcgggtcaagccactggtcaaggccgtggcgggagcgggcatgccggcggtggcgatc
accgaccagagcaacatgtgctcgctggtgaagttctacaagaccgccatgggcggcggc
atcaagcccatttgtggcgccgatatctggctcgacagtcctgtcgaggacggccccttg
agccgcatgaccctcctggtgatgaatgcaaagggttatcgcaatctcaccgaactggtt
tcccgcggctggtccgaaggccagagcaatggcctggtgatcatccagcgcgactgggtg
aaagaggctgccgaaggcctgatcgccctgtccggcgcgaaggaaggggagatcggcatg
gcgctgctcagcggtgaccaggtcggcgccgaagcgctgctggccgagtggcaggccgtg
ttccccgatcgtttctacctggagctgcagcgtaccgcgcgagtcaacgacgaggagcac
gtccatgcggccgtcgccctggccgaccgttgcggcgcaccgctggtggccaccaacgac
gtgcgcttcatcaagcccgatgacttcgaggcccacgagacccgcgtgtgcatcggcgag
ggccgggtcctggatgacccgcgccgcccgcgcaacttctccgaccagcagtacctcaag
tctccggcggaaatggccgagctgttcgccgatatccccgaggccctggaaaacaccgtc
gagatcgccaagcgttgcaatatcgaggtccaactgggcaagcacttcctgcccgacttc
cccacgcccaatggcatgagcatcgacgactacctgcgtcatgcctccttcgaaggactg
gaagagcggctggccgtgctcctgccgaaggacaccacacctgattacgaagagaagcga
caggcctacatcgaccgcctggagttcgagctgggcaccatcatccagatgggcttcccc
ggttacttcctgatcgttgcggacttcatccagtgggccaagaacaatggcgtgccggtg
ggaccggggcggggctcgggtgccggttcgctggtggcctacgtgctgaagatcaccgac
ctcgacccgctggcctacgacctgctgttcgagcgattcctcaaccccgaacgcgtttcc
atgcccgacttcgacgtcgacttctgcatggatggccgcgaccgggtgatcgactacgtg
gccgacaagtacgggcgcaacgcggtgagccagatcatcaccttcggctccatggcggcc
aaggcggtggtgcgcgacgtggcccgggtgcagggcaagtcctacggtctggccgatcgt
ctgtcgaagatgatccccttcgaagtcggcatgaccctggaggcggcctacaaccaggaa
gaagtgctgcgcgacttcctcaagactgacgaggaagcccaggaaatctgggacatggcc
ctgaagctggaaggcatcacccggggtaccggcaagcacgccggtggcgtggtgatcgcc
ccgaccaagctgaccgacttctcgccgatcgcctgtgacgaagagggtgccggcctggtg
acccagttcgacaaggacgacgtggaggccgccggcctggtgaagttcgacttcctcggc
ctgcgtaccctgacgatcatcaaatgggccatggagatgatcaaccgcgagcaggagaag
cagggcctgccgctggtggacatcgaccgcatccccctggatgacaagaaaacctacgac
atgctgcagaaggcggagaccaccgcggtcttccagctcgaatcccgcggcatgaaggag
ctgatcaagaagctcaagccggactgcctggaagacatgatcgctctggtggcgctgttc
cgcccggggccgctgcagtcgggcatggtggacgacttcatcaaccgcaaacacggtcgc
gcggagctttcctacccgcacccggactaccagtacgccggcctcgagcccgtgctcaag
cccacctacggcatcatcctgtatcaggaacaggtgatgcagatcgcccaggtaatggct
ggctacaccctcggcggcgccgacatgctgcgccgcgccatgggcaagaagaagcccgaa
gaaatggccaagcagcgcggcggcttcatcgaaggttgttcccgcaacggcatcgacccc
aacctctcgggcaacatcttcgacctggtggagaagttcgccggctacggcttcaacaaa
tcccactcggccgcctacggctgggtttcctaccagaccgcctggctcaaggcgcacttc
ccggcgcccttcatggccgcggtactcaccgcggatatgcacaacaccgacaaggtggtg
acgctgatcgaagaatgccggcacatgaagctgcgcatcgtcgcgccggacgtgaacaac
tccgagtaccgcttcaccgtggatgacgacggccagatcgtctacggcctgggcgccatc
aaaggcgtgggtgaagggccggtggaagccatcaccgagtgccgtgccgaaggtggcccc
ttcaaggatctgttcgacttctgcaaccgcgtcgacctcaagcgcatcaacaaacgcacc
ctggaagccctgattcgctgcggtgcgctggatcgactgggtccgttcttcagcaacgaa
cccaaggcctaccaggcgggtatcgacaccaaccgcgcagtgctgctggccgccatggaa
gaagccatccaggccgcagagcagactgcccgcagccatgacagcggccatatggacctc
ttcggcggcctgttcgccgagccggaggcggatgtctacgccaatcatcgccgggccaag
gaaatgtccctgaaggaacgtctgaagggcgagaaggacaccctgggcctctacctcacc
ggtcacccgatcgatgaatacgagggcgaggtccgtcgcttcgcccgccagcgcatcgtc
gagctgaagccggcgcgggacacccagatcatcgccggcctgatcgtcaacctgcgggtg
atgaagaacaagaagggcgacaagatgggcttcatcaccctcgacgaccgttccggccgt
atcgaggcttcgcttttcgccgatgccttcaacgcggccagtggcctgctgcagaccgac
gccatggtggtggtggaaggggaggtgagccacgacgatttctccggcggcctgcgcctg
cgcgccaagcgtgtgctgagcctggaggaagcccgtaccggcctggcggaaagcctgcgc
atgaaggtggacttcagtgccctgcagggcgatcgcctgcgctggctggcggagttgtgc
ggtcgccatcgcggttcctgccccctgaccctggactacagcggcaatgacgcgaaggcc
ctgctgcagttcggcgatgactggcgaatcgcaccggccgacgctttgattcaggcattg
cgtgaccagttcgggcgcgacaacgtcttcctgcactaccgctga
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