Metapseudomonas lalkuanensis: FXN65_23620
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Entry
FXN65_23620 CDS
T07120
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
plal
Metapseudomonas lalkuanensis
Pathway
plal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FXN65_23620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plal03019
]
FXN65_23620
Enzymes [BR:
plal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FXN65_23620
Messenger RNA biogenesis [BR:
plal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FXN65_23620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QEY64904
UniProt:
A0A5J6QQZ0
LinkDB
All DBs
Position
5089568..5090974
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AA seq
468 aa
AA seq
DB search
MLKKLFQSFRSPLRRAQHPRSTPEVLGNNQHSLHRSGISRNAVLVVDRLQKAGYQAYVVG
GCVRDLLLNLRPKDFDVATNATPEQVRAEFRNARVIGRRFKLAHVQFGREIIEVATFRAN
HPQGEEEEDSNQASRNESGRILRDNVYGSLEDDAQRRDFTINALYYDPTTERILDYAHGV
HDIRNRLVRLIGIPEQRYQEDPVRMLRAARFAAKLDFEIEKHSAAPIRRLAPMLREIPSA
RLFDEVLKLFLGGKAERTFELLVEYDLFAPLFPASAAALERNPEYTGRLIRQALINTDER
IRQGKPVTPAFLFAALLWPALPARAAQLQERGMPPIPAMQEAAHVLIMEQVQRTAIPKRF
SIPIREIWDMQERLPRRNGKRADLLLENPRFRAGYDFLLLRESAGEKTDGLGDWWTDYQD
ASDSQRRNMIRELNTKDEQQPSGQRRRRGGSRRRRGPRSEGAPDNSGD
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgttccagtctttccgttcgccccttcgccgcgcccagcatccgcgc
agcactcccgaagtactgggcaataatcagcattcgctgcaccgttcgggcatcagtcgc
aatgccgtgctggtcgtcgatcgcctgcagaaggctggctaccaggcctacgtcgtcggc
ggttgtgtccgtgacctgctgctgaacctgcgccccaaggacttcgacgtggccaccaac
gccacacccgagcaggtgcgcgccgaattccgcaatgcgcgggtgatcggccgccgcttc
aagctggcccatgtgcagttcggccgggaaatcatcgaggtcgccaccttccgcgccaac
cacccgcaaggggaggaagaggaagacagcaaccaggcctcgcgcaacgaaagcggccgc
atcctgcgcgacaacgtgtacggcagcctggaagacgacgcccagcgtcgcgacttcacc
atcaacgcgctgtactacgacccaaccaccgagcgcatcctcgattacgcccacggcgtt
cacgacatccgcaaccgcctggtgcgcctgatcggcattcccgagcagcgttaccaggaa
gacccggtgcgcatgctccgcgccgcgcgtttcgccgccaagctggacttcgagatcgag
aagcacagcgccgcgcccattcgccgcctggcaccgatgctgcgggaaatcccctcggcg
cgcctgttcgacgaagtgctcaagttgttccttggcggcaaggccgagcgcaccttcgaa
ctgctggtggagtacgacctgttcgccccgctgttcccggccagcgccgcagccctggaa
cgcaaccccgaatacaccggccgcctgattcgccaggcgctgatcaacaccgacgagcgc
attcgccagggcaagcccgttaccccggccttcctcttcgccgccctgctctggccggcc
ctgcccgcccgcgccgcgcaactgcaggaacgcggcatgccgccgatcccggcgatgcag
gaagcggcccatgtcctgatcatggagcaggtccagcgcaccgccattcccaagcgtttc
agcatcccgatccgtgaaatctgggacatgcaggagcgcctgccgcgtcgtaacggcaag
cgtgccgacctgctgctggagaatccgcgattccgcgccggttacgacttcctcctgctg
cgcgaaagcgccggcgagaagaccgacggcctgggtgactggtggacggactaccaggac
gccagcgacagccagcgccgcaacatgatccgcgagctcaataccaaggacgagcaacag
cccagtggccagcgccgccgccgtggtggcagccgtcgtcgtcgcggtccgcgcagcgaa
ggcgcacccgacaattcgggcgattga
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