Metapseudomonas lalkuanensis: FXN65_23715
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Entry
FXN65_23715 CDS
T07120
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
plal
Metapseudomonas lalkuanensis
Pathway
plal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FXN65_23715 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plal03019
]
FXN65_23715 (pnp)
03016 Transfer RNA biogenesis [BR:
plal03016
]
FXN65_23715 (pnp)
Enzymes [BR:
plal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FXN65_23715 (pnp)
Messenger RNA biogenesis [BR:
plal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FXN65_23715 (pnp)
Transfer RNA biogenesis [BR:
plal03016
]
Prokaryotic type
tRNA degradation factors
FXN65_23715 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
KH_PNO1_2nd
S1_2
DUF7275
Motif
Other DBs
NCBI-ProteinID:
QEY64923
UniProt:
A0A5J6QR02
LinkDB
All DBs
Position
complement(5110668..5112776)
Genome browser
AA seq
702 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTMDEDVTVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFLNEVQVICTVVST
NKKTDPDIASMIGTSAALAISGIPFNGPIGAARVAYHEEAGYLLNPNYEQLKASALDMVV
AGTEDAVLMVESEAQELTEDQMLGAVLFAHQEFQSVITAVKEFAAEAGKPAWNWTAPAEN
TALLGAIKAEFGEAISQAYTITIKQDRYNRLDELRDQVVARFAGEEEGQFPTGEVKDAFG
LLEYRTVRENIVNGKPRIDGRDTRTVRPLKIEVGVLDKTHGSALFTRGETQALVVATLGT
ARDAQLLDTLEGERKDAFMLHYNFPPFSVGECGRMGSAGRREIGHGRLARRGVSAMLPKG
DEFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGDKFAVL
TDILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALEQALEARLNILGQMN
QVIAQSRSELSANAPTMIAMKIDTDKIRDVIGKGGATIRSICEETKASIDIEDDGSVKIF
GETKEAAEAARQRVLGITAEAEVGKVYVGKVERIVDFGAFVNILPGKDGLVHISQISDKR
IDKVTDVLQEGQEVKVLVLDVDNRGRIKLSIKDVEAAEASGV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaagttccagttcggtcaatcgaccgttaccctcgagactggc
cgtatcgcccgtcaagcttccggtgccgttctggtcaccatggacgaagacgtcaccgtt
ctggtgaccgtggtcggcgccaagcaggccgacccgggcaagggtttcttcccgctgtcc
gtccactaccaggagaaaacctacgccgctggccgtatccccggtggtttcttcaagcgt
gaaggccgtccttccgagaaggaaaccctgacctcgcgcctgatcgaccgtccgatccgc
ccgctgttcccggaaggtttcctgaacgaagtccaggtcatctgcaccgtggtctccacc
aacaagaagaccgatccggacatcgcttccatgatcggtacttccgcggccctggccatc
tccggcattccgttcaacggcccgatcggtgccgcgcgcgtggcctaccacgaagaagcc
ggctacctgctgaaccccaactacgagcagctgaaagcctccgccctggacatggtcgtt
gccggtaccgaagacgccgtgctgatggttgagtccgaagcccaggagctgaccgaagac
cagatgctgggcgccgttctgttcgcccaccaggaattccagtccgtgatcaccgcggtc
aaggaattcgctgccgaagccggcaaaccggcctggaactggaccgccccggctgaaaac
accgctctgctcggcgccatcaaggccgagttcggcgaggccatctcccaggcctacacc
atcaccatcaagcaggaccgctacaaccgcctggacgagctgcgcgaccaggtcgttgcc
cgcttcgctggcgaggaagaaggccagttcccgactggtgaggtgaaagacgccttcggc
ctgctggaataccgcaccgttcgcgagaacattgtcaacggcaagccgcgtatcgatggc
cgtgacacccgcaccgtacgtccgctgaagatcgaagtcggcgtgctggacaagacccac
ggttccgccctgttcacccgtggtgaaacccaggccctggtcgtcgccaccctcggcacc
gcccgtgacgcccagctgctggacaccctggaaggcgagcgcaaggacgccttcatgctg
cactacaacttcccgcccttctcggtaggtgagtgcggtcgtatgggcagcgctggccgc
cgcgaaatcggccacggccgtctggcccgtcgtggcgtttccgccatgctgccgaaaggt
gacgagttcccctacaccatccgcgtggtttccgagatcaccgagtccaacggctccagc
tccatggcttccgtctgcggcgcttccctggccctgatggacgccggtgtgccgatgaag
gcgccggttgccggtatcgccatgggtctggtgaaggaaggtgacaagttcgccgtcctg
accgacatcctgggcgacgaagaccacctgggcgacatggacttcaaggtagccggtacc
gccaagggcgtgaccgcgctgcagatggacatcaagatcaacggcatcaccgaagagatc
atggagatcgctctggagcaggctctggaagcgcgtctgaacatcctcggccagatgaac
caggtgatcgcccagtcccgcagcgagctgtctgccaacgctccgaccatgatcgcgatg
aagatcgacaccgataagatccgcgacgtaatcggcaagggcggcgccaccatccgctcg
atctgcgaagaaaccaaggcctccatcgacatcgaagacgatggcagcgtgaagatcttc
ggcgaaaccaaggaagctgccgaggctgcacgtcagcgcgttctgggtatcaccgctgaa
gccgaagtcggcaaggtgtacgtgggcaaggtcgagcgcatcgtcgacttcggcgccttc
gtcaacatcctgccgggcaaggacggtctggtgcacatctcgcagatcagcgacaagcgc
atcgacaaggtcaccgacgttctgcaggaaggccaggaagtcaaagtcctggttctcgac
gtcgacaaccgtggccgcatcaagctgtcgattaaggacgtggaagctgccgaagcttcc
ggcgtctga
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