Metapseudomonas lalkuanensis: FXN65_23725
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Entry
FXN65_23725 CDS
T07120
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
plal
Metapseudomonas lalkuanensis
Brite
KEGG Orthology (KO) [BR:
plal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plal03016
]
FXN65_23725 (truB)
Enzymes [BR:
plal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FXN65_23725 (truB)
Transfer RNA biogenesis [BR:
plal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FXN65_23725 (truB)
Prokaryotic type
FXN65_23725 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
QEY64925
UniProt:
A0A5J6QTG4
LinkDB
All DBs
Position
complement(5113294..5114211)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGVLILDKPRGMSSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYETLAQLGVTTSTGDAEGEVIERREVTVGRQDIEALLPRFRGEIK
QIPPMYSALKKDGQPLYKLARAGEVVEREARSVTIARLDLLACENGHARLAVACSKGTYI
RTLVEDLGQALGCGAHVAELRRTQAGPFVLAQAISLETLEKVHAEGGNEALDQFLLPVDS
GLEHWPLIQLTEHSAYYWLHGQPVRAPEAPKFGMMRVQDHTGRFIGIGEVSDDGRVAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtgaaacgtatccgccgcaacgtcagcggcgtgctgatcctcgacaagccg
cgcggcatgagttccaacgccgcgctgcagaaggtgcgctggctgctcaatgccgagaag
gccggccataccggcagtctcgaccccctggccaccggcgtcctgccgctgtgcttcggc
gaggcgaccaagttttcccaatacctgctggacgccgacaagggctatgaaaccctggcc
cagctgggcgtcaccacttccaccggcgacgccgaaggtgaagtgatcgaacgtcgcgag
gtgaccgttggtcgccaggatatcgaggcgctgctgccgcgttttcgcggtgaaatcaag
cagatacctccgatgtactcggccctgaagaaggacggccaacccctctacaagctggct
cgtgctggcgaagtagtggagcgcgaagcgcgttctgttactattgcgcgcttggatttg
ctggcctgtgaaaacggccatgcaagactggccgtagcttgcagcaagggcacctatatc
cgcaccctggtcgaggatctcggccaggcactgggatgcggggcacatgtggcagagctg
cgccggacccaggcgggccccttcgtgctggcccaggcgatcagcctggagaccctggag
aaggtccacgccgagggtggcaacgaggcactcgaccagttcctcctgccggtcgacagc
gggctggagcactggccgctgatccagctgaccgagcacagcgcctactactggcttcat
ggccagccggtgcgggctccggaagcacccaagttcggcatgatgcgagtacaggatcac
accggtcgcttcatcggaatcggtgaagtgagcgatgacgggcgcgttgcgccgcgtcga
ctgattcggtcggaatga
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