Metapseudomonas lalkuanensis: FXN65_25415
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Entry
FXN65_25415 CDS
T07120
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
plal
Metapseudomonas lalkuanensis
Pathway
plal03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FXN65_25415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plal03019
]
FXN65_25415
03009 Ribosome biogenesis [BR:
plal03009
]
FXN65_25415
Messenger RNA biogenesis [BR:
plal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FXN65_25415
Ribosome biogenesis [BR:
plal03009
]
Eukaryotic type
Pre-60S particles
RNases
FXN65_25415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QEY65232
UniProt:
A0A5J6QU08
LinkDB
All DBs
Position
complement(5504736..5505278)
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AA seq
180 aa
AA seq
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MQNALNLIWIDLEMTGLNPDTDVIIEMATIVTDSDLNVLAEGPTIAIHQSDEILAGMDEW
NTRQHGQSGLTQRVRESQISMAEAEAQTLAFLEQWVPKGKSPICGNSICQDRRFLYRHMP
QLEAYFHYRNLDVSTVKELAARWAPKVRDGVKKSSSHLALDDIRDSIAELQHYREHFFKI
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatgccctgaacctgatctggatcgatctggaaatgaccggcctgaatccggac
acggacgtgatcatcgagatggccaccatcgtgaccgacagtgatctgaacgttttggcc
gaggggccgaccatcgccatccaccagagcgacgagattctcgccggcatggatgagtgg
aacacccgccagcatggccagagcggcctcacccagcgagtgcgcgaaagccagatcagc
atggcggaagcagaggcccagaccctggctttcctcgagcagtgggtgcccaagggcaaa
tcgccgatctgcggcaacagcatctgccaggaccgccgcttcctctaccgtcacatgccg
cagctggaagcctacttccactaccgcaacctcgatgtgtccaccgtgaaggagctggct
gcacgctgggcgccgaaagtgcgtgacggggtgaagaagagcagcagccacctggcgctg
gatgacatccgtgactcgatcgcggagctacagcattaccgggaacacttcttcaagatt
tga
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