Metapseudomonas lalkuanensis: FXN65_27535
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Entry
FXN65_27535 CDS
T07120
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plal
Metapseudomonas lalkuanensis
Pathway
plal03420
Nucleotide excision repair
plal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FXN65_27535 (uvrD)
03430 Mismatch repair
FXN65_27535 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plal03400
]
FXN65_27535 (uvrD)
Enzymes [BR:
plal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FXN65_27535 (uvrD)
DNA repair and recombination proteins [BR:
plal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FXN65_27535 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FXN65_27535 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QEY65635
UniProt:
A0A5J6QVD6
LinkDB
All DBs
Position
5994313..5996493
Genome browser
AA seq
726 aa
AA seq
DB search
MHDDLSLLLNSLNDAQRQAVAASLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSIL
SVTFTNKAAAEMRQRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLAENFQILDSDD
QQRLVKRVIRDLGLDEQRWPARQAQWFINGQKDEGIRPQHIQAGGDLFLGTMLKIYEAYE
AACARTGVIDFSELLLRALDLWRDRPSLLEHYQRRFRHVLVDEFQDTNAVQYAWLRLLAK
GGQSLMVVGDDDQSIYGWRGARIENIQQFSSDFPDTEVIRLEQNYRSTAGILKAANALIA
NNQGRLGKELWTEGEDGEPIGLYAAFNEHDEARYVVESIESALKDGMARSEIAILYRSNA
QSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLLDGRGNDAALERVINVPPRGI
GEKTVESIREFSRVNDVSMWEAMRLMIANKALAGRASSALGAFMELIENLTAKCLDMPLH
LMTQTVIEQSGLVAYHKDEKGEKGQARVENLEELVSAARAFENEEPEDDLTPLQAFLSHA
SLEAGETQADAFEDSVQLMTLHSAKGLEFPLVFLVGMEEGLFPHKMSMEDPTRLEEERRL
AYVGVTRAMQRLVLTYAETRRLYGSETYNKVSRFVREVPPQLIREVRLNNSISRPMGAGS
RHGSIFDGAAVPETPFSLGQRVQHALFGEGTILNFEGAGAQARVQVKFESEGSKWLMLAY
AKLQPL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgatctctccctcctcctgaactccctcaacgacgctcaacgccaggccgta
gcggcctcgctgggacgtcaactggtgcttgccggcgccggttccggcaagacccgcgtg
ctggtgcaccgcatcgcctggctgatccaggtggagcaggcctcgccgcattcgatcctg
tcggtcaccttcaccaacaaggccgccgccgagatgcgccagcgcatcgagcaactgctg
gggatcaacccggcgggcatgtgggtcggcaccttccacggcttggcgcaccgcctgttg
cgcgcccactggcaggaagcgggcctggccgagaatttccagatcctcgacagcgacgac
cagcagcgcctggtcaagcgggtgatccgcgacctgggcctcgacgagcagcgctggccg
gcacgccaggcgcagtggttcatcaacgggcagaaggacgagggcatccgtccgcagcac
atccaggccggcggcgacctgttcctcggcaccatgctgaagatctatgaagcctacgag
gcggcctgcgcgcgcaccggggtgatcgacttctccgaactgctgctgcgcgccctcgac
ctctggcgcgaccgcccgagcctgctggagcactaccagcggcgcttccgccacgtgctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggctgcgcctgctggccaag
ggtggccagagcctgatggtggtgggtgacgacgaccagtcgatctacggctggcgcggc
gcgcggatcgagaacatccagcagttctccagcgatttccccgacaccgaggtaattcgc
ctggagcagaactaccgctccaccgcgggcatcctcaaggccgccaacgccctgatcgcc
aataaccaggggcgcttgggcaaggagctgtggaccgagggcgaagacggcgaacccatc
ggcctgtatgccgcgttcaacgagcacgacgaagcccgctacgtggtggagagcatcgag
agcgccttgaaagacggcatggcccgcagcgagatcgccatcctctaccgctccaacgcc
cagtcgcgggtgctggaagaggccctgctgcgggaaaagatcccctaccgcatctatggc
ggccagcgcttcttcgaacgtgccgagatcaagaacgccatggcctacctgcgcctgctc
gacggccgtggcaacgacgccgcgctggagcgggtgatcaacgtaccgccgcgcggcatc
ggcgagaaaaccgtggaaagcatccgcgagttctcccgcgtcaacgacgtctcgatgtgg
gaagcgatgcgcctgatgatcgccaacaaggccctggccggtcgcgcctccagtgccctg
ggggccttcatggagctgatcgagaacctcaccgccaagtgcctggacatgcccctgcac
ctgatgacccagacggtcatcgagcagagcggcctggtggcctatcacaaggacgagaag
ggcgagaaaggtcaggcccgggtggaaaacctggaagaactggtcagcgccgcccgcgcc
ttcgagaacgaagagcccgaggacgacctcaccccgctgcaggccttcctcagccacgcc
tcgctggaggccggggaaacccaggccgatgccttcgaggacagcgtgcaactgatgacc
ctgcacagcgccaagggcctggaattcccgctggtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcatggaagacccgacccgcctggaggaggagcgccgcctg
gcctacgtcggcgtcacccgtgccatgcagcggctggtgctgacctatgccgaaacccgc
cgcctctacggcagcgagacctacaacaaggtctcgcgtttcgtccgcgaagtgccgccg
cagctgattcgcgaagtgcgcctgaacaacagcatcagccgtcccatgggcgccggcagc
cgccacggttccatcttcgatggcgccgccgtaccggaaacgcccttctccctgggccag
cgggtgcagcacgccttgttcggcgaaggcaccatcctcaacttcgaaggcgccggcgcc
caggcgcgggtgcaggtgaaattcgagagcgagggcagcaagtggctgatgctggcctac
gccaagctgcagccgctctga
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