Candidatus Planktophila lacus: A1s21148_01795
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Entry
A1s21148_01795 CDS
T05050
Name
(GenBank) peptide/nickel transport system permease protein
KO
K02034
peptide/nickel transport system permease protein
Organism
plan
Candidatus Planktophila lacus
Pathway
plan02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plan00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A1s21148_01795
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plan02000
]
A1s21148_01795
Transporters [BR:
plan02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
A1s21148_01795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
ASY10294
UniProt:
A0AAD0E2Z8
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All DBs
Position
358610..359596
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AA seq
328 aa
AA seq
DB search
MSLNSATNSEVDAPISASPAIAGRSPRQIAWSRFKRNKVGMTAAGISIFLLSMSLFAPIV
CRVLGINPNDLNLEGLNSSGIPTGDLAGFSMEHPLGVIPGTGRDLLAQLLYGSRISFMIA
ILTTATALTIGFFVGIVGGYFRGRVDGYLGRFTDFLLAFPAFFMIVALSEPMVDRIEKFG
IAEGNGARVLFLILFLSFFGWPGFSRLIRSQVLSLREREFVTAAQAMGATRRRIILKELV
PNLWAPVIVVVSLSLPGYLASEAVFSFLGLGVQPPASTWGILLSNATRFVTVMPSFFLIT
AASLVIVVLAFNLVGDALRDALDPRADK
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcaactcagcaactaactcagaagttgatgcaccaattagcgctagccctgca
atcgctggccgtagcccgcgccagatcgcatggagccgctttaagcgaaataaagtaggc
atgacagcagcaggaatcagtattttcctgctgagcatgtcgctctttgcgccaatcgtg
tgccgagttttggggatcaatccgaacgacctaaaccttgaaggtttaaatagcagtggt
attccaacgggtgatttagccggctttagcatggaacatccacttggcgtaattcccgga
acgggtcgcgatttactggcccaacttctttacggttcacgtatctcatttatgatcgca
attcttacaactgcaactgcgctaactattggtttcttcgtaggaattgttggtggttat
ttccgcggccgcgttgatggatacctcggtcgctttactgacttccttctcgcattccca
gctttctttatgatcgttgcacttagcgaaccaatggtcgatcgcattgaaaaattcgga
attgcagaaggcaatggcgctcgcgttctcttcttaatcctcttcttatctttcttcgga
tggccgggattttctcgactaattcgttcacaggttctctcacttcgtgaacgcgaattc
gtaaccgctgcacaagcaatgggtgcaacccgtcgtcgaattattctgaaagaacttgtc
cctaatctttgggcgccggtaattgtggttgtctcgctttcactccctggctacctcgca
tcggaagcggtcttctcattcctaggtctgggtgttcaaccaccagcatctacttggggc
atcctgctttctaatgccacccgcttcgtaaccgttatgccgagcttcttcctaattaca
gcagcctccctagtcatcgtagttctggcctttaacttggtcggcgatgcgctgcgcgat
gcgctagacccaagagccgacaaataa
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