Candidatus Planktophila lacus: A1s21148_01875
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Entry
A1s21148_01875 CDS
T05050
Name
(GenBank) DNA repair protein RecO (recombination protein O)
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
plan
Candidatus Planktophila lacus
Pathway
plan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A1s21148_01875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plan03400
]
A1s21148_01875
DNA repair and recombination proteins [BR:
plan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A1s21148_01875
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A1s21148_01875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
Motif
Other DBs
NCBI-ProteinID:
ASY10309
UniProt:
A0AAD0E307
LinkDB
All DBs
Position
377931..378662
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AA seq
243 aa
AA seq
DB search
MSLYRDEAIILRTQKLGEADRIITLLTREHGRVRGVAKGVRRTMSKFGARLEPGSHVDIQ
LHKGRTFDTITQVEAINNYGEALTDDYQRWTIASAILETAERFTSQEYEPALQEFQLVVG
GMKALAENRYDASLILDAFLLRSLAIGGYAPSTTNCSRCEKPGPHRYFSLVGGGSVCMEC
RPSASATPAPETLQLLGALLSSDWDVAQASEPRHRREASGLVIAYLQWHLERGLRSLPIV
ERV
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgagcctttatcgtgacgaagcaattattttgcgcacccagaagttgggtgaagcagat
cgcatcatcacgctcttaactcgcgaacatggtcgcgttcgtggcgttgccaaaggcgtt
cgccgcaccatgtctaaattcggagcgcgccttgaacccggtagccatgtagatatccaa
cttcataaagggcgcaccttcgacacgatcacccaagttgaagcgatcaataattacggt
gaagcgctaactgatgattaccagcgctggacaatcgcatcagcgattctggaaacggcg
gaacgttttacttcgcaggaatacgaaccagcgttgcaggaatttcaattagttgttggt
ggcatgaaggcgctagccgaaaatcgttatgacgcatcgcttatcttggatgcattctta
ctgcgctcacttgctatcggtggctatgcgccatcgactaccaattgttcgcgctgcgaa
aaacccggaccacatcgttacttctcgctagttggtgggggatctgtatgtatggaatgt
cgcccatcggcatcggcaactcccgcccctgaaaccctgcaattactcggcgctcttttg
agtagtgattgggatgttgcgcaagcaagtgaaccgcgacatcgccgcgaggctagtggt
ttagtcattgcttacttacaatggcatctcgaacgtggcctacgaagcctgccgatcgtg
gagagagtttaa
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