Candidatus Planktophila lacus: A1s21148_03035
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Entry
A1s21148_03035 CDS
T05050
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plan
Candidatus Planktophila lacus
Pathway
plan03030
DNA replication
plan03430
Mismatch repair
plan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A1s21148_03035
03430 Mismatch repair
A1s21148_03035
03440 Homologous recombination
A1s21148_03035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plan03032
]
A1s21148_03035
03400 DNA repair and recombination proteins [BR:
plan03400
]
A1s21148_03035
Enzymes [BR:
plan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A1s21148_03035
DNA replication proteins [BR:
plan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A1s21148_03035
DNA repair and recombination proteins [BR:
plan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A1s21148_03035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
ASY10517
UniProt:
A0AAD0DYV0
LinkDB
All DBs
Position
601517..605050
Genome browser
AA seq
1177 aa
AA seq
DB search
MTTENPTQPKASKDSFVHLHVHTEYSMLDGAARIGDLVEEVARQEMPAIAMTDHGNVFGA
FDFYKQAVKAGVKPIIGIEAYVAPESRFDKKKVQWADGGDDDVSGGGAYTHMTILAENNH
GLANLFRLSSLASLEGYYYKPRMDRELLSKYADGLIATTGCPGGEIQTRLRMGNYKEAMR
AASDYRDIFGAHNFFLELMDHGIDVETRVKEDLIKLGRELKLPLLATNDLHYTRHEDAPA
HEALLCVQSGSTLADPKRFKFDNDEFYLKSPAQMRELFKDLPEACDNTLLIAERCNVKLR
EGENLMPAFAVPPGETEDSWLRKEAERGLVTRFGDKATDAHRVRLSYELDVMANMGFPGY
FLVVADLVAHAKKVGIRVGPGRGSAAGSLVAYSLGITGLDPIEHGLLFERFLNPERISMP
DIDLDFDERRRSEMIRYATEKYGEDRVAQIITYGTIKSKQSIKDATRVLGYPYVIGEKLT
KALPPSVMGKDISLAGVFDSQDSRHGEAGEFRELYNTDPDSKKVVDLARGLEGLKRQWGV
HAAGVILSREPLLDVIPIHRREADGAIITQFDMGACESTGLLKMDFLGLRNLSVLDDALL
NIKENQGIDVVLEDLPLSDQKTFELLSRGDTLGVFQLDGGPMRALLRSMAPDSFADISAV
IALYRPGPMGENAHNNYADRKNGRKPVEPIHPELSEVLQEILGDTYGLIVYQEQVMAIAQ
KVAGFSLGRADLLRKAMGKKNKEILDKEYIPFEAGMKENGFSTAAIKRLWDVLIPFSDYA
FNRAHSAGYGVVSFWTGYLKANYPTEYMAALLTSVRDDKDKSALYLSECRRMGIKVLPPD
VNESNAEYTPRGKDIRFGLAAIRNVGEGVVASIKSARTTKGAFTSFGDFLAKVDAQVCNK
KTIESLIKGGAFDSLSHPRKALMSVHLEAIDSVIETKRAEAIGQFDLFGGESMTQVSGLE
IEIPNFEWDKSTLLSFEREMLGLYVSDHPLLGVEHILRSNTDMSISALQSDESTPDGMVT
LGGLITGVQRKVSRTGSSWAIVSLEDLEGAIEVLFFSNTYNQYALTLIEDRVVTVRGRFE
RRDDVLRFTALEMKSLDVSTGPIGPLLISLPIAQCTPPVVDRMKEILRSHPGKREVHMQI
DDQGVLTTMKIDALVTASPSLSADLKSILGPDCLVRM
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaccgaaaacccaacccagccaaaagcgagtaaagattcttttgtgcaccttcat
gtgcacactgaatactcaatgctcgatggtgccgcacgtattggcgatctcgtagaagaa
gtagcgcgccaagagatgccggcgatcgcaatgactgatcacggaaatgtgttcggcgct
tttgatttctataagcaagcggtcaaggcgggcgttaaaccaatcatcggtatcgaagct
tacgttgctccagaatcgcgctttgataagaagaaggttcaatgggccgatggtggagat
gacgatgtttcaggcggcggtgcatatacgcatatgaccatcttggccgagaacaatcat
ggtctggctaatttatttagactctcttctcttgcttcccttgaaggttattactacaag
ccgcgtatggatcgtgaactactctctaaatatgcagatggcttaattgcaactactggt
tgcccaggcggagaaatccagactcgcctgcgtatgggaaattacaaagaagcgatgcgc
gcggcaagtgattacagagatatttttggggcacataacttcttccttgagttaatggat
cacggtattgatgttgaaacccgcgttaaagaagatctcatcaaacttggccgcgaactt
aaacttccgctgcttgcgacaaatgacctgcactacacccgacacgaagatgcgcctgca
catgaagccctgctctgcgtgcaatcaggctccactctggcagatccaaagcgctttaaa
ttcgataacgatgagttctatctaaagtcacctgcgcaaatgcgcgagctctttaaggat
ctgcctgaagcctgcgataacaccctgctcatcgccgagcgctgcaatgtaaaacttcgc
gaaggcgaaaatctcatgcccgcctttgcggtgccgccaggtgaaacagaagattcttgg
ttacgtaaagaggcagagcgcgggctggttacacgttttggagataaggcaacagatgct
catcgcgttcggttgagttacgaattagatgtaatggccaatatgggatttccaggttac
ttcttagttgttgctgacttagttgcgcatgccaagaaagttggaatccgtgttggtcct
ggtcgcggctctgctgcgggctcattagttgcgtattcactcggaattaccggccttgat
ccaatcgaacacggcttactcttcgagcgattcttaaatccagaacgtatctctatgcct
gatatcgatctggactttgatgaacgtcggcgcagcgagatgatccgttatgcaactgag
aaatacggcgaagatcgcgtagcccagatcatcacctacggcacaattaaatctaagcaa
tccattaaagatgccactcgcgttttagggtacccatatgtaattggtgagaagttaacg
aaagcgcttccaccttcagtgatgggaaaagatatttcactcgctggagtattcgattca
caagactcgcgccatggcgaggctggcgaatttcgcgagctctataacaccgaccctgat
tcaaagaaggttgttgatttagcgcgcggactcgagggactcaagcgccaatggggcgtg
catgccgctggcgtcatcctttcgcgtgaaccacttcttgatgtaatcccaatccatcga
cgcgaagccgatggggcaatcatcacccagttcgatatgggcgcttgcgaatcaacaggc
ttgttaaagatggacttcctgggtcttcgcaacttatccgtactagatgacgcactacta
aatatcaaagagaatcaaggaatagatgtagtccttgaagatctaccactgtcagatcaa
aagacattcgaactcttatcgcgcggtgacacacttggtgtatttcaactcgatggtgga
ccaatgcgcgcactccttcgcagcatggcgccagattcatttgccgacatatctgcggtt
atcgcgctctaccgccctggtccaatgggcgaaaatgcacacaataactatgccgatcgc
aagaacggacgcaaaccagttgaaccaattcatccagagctctctgaagttctccaagaa
attttgggggatacctacggtcttattgtttatcaagaacaagtaatggcgatcgcccag
aaagttgccgggttctcacttggtcgtgcagatcttttacgtaaggccatgggtaagaag
aacaaggaaattctggataaggagtacatacctttcgaagctggcatgaaagagaatgga
ttctcaaccgccgccataaaacgtttatgggatgttctgattcccttctctgactacgca
tttaaccgagcacatagcgcaggttacggtgttgtttcattctggaccggttatttaaag
gcaaattatccaaccgaatatatggcagccctgcttaccagtgtgcgtgatgataaagat
aagtcagcgctctacttatctgaatgtcgtcgcatgggtatcaaggttctgccacccgat
gtcaatgaatcaaatgctgaatacacaccgcgcggcaaagatattcgctttggacttgct
gcaatccgtaacgttggtgaaggcgtagtcgcttccataaagtctgcgcgtacaaccaaa
ggtgccttcacttcatttggtgatttcctcgccaaggtagatgcgcaagtttgcaataag
aaaacaattgaatctttgattaagggtggagcgtttgattctctaagccatccacgcaag
gctctaatgtctgttcacctagaagctattgattcggtaatcgaaaccaagcgagcagag
gcgatcggtcaatttgatctctttggaggcgagtcgatgacgcaagtttcaggtctggaa
attgagattccaaacttcgaatgggataagtcaacgctgcttagttttgaacgcgaaatg
ctgggcctctatgtttcagatcatccgctacttggtgttgaacatatcttgcgttccaat
accgatatgtctattagcgcgctacaaagtgatgaaagtacgccagatggcatggtcact
ttgggcggcttgattacaggcgttcaacgcaaggtttcccgcacaggttcatcgtgggcg
attgttagtctggaagatctggaaggcgctatagaagttctcttcttctcaaatacttac
aaccaatatgcacttaccttgattgaagatcgcgttgtaactgttcgcggtcgattcgaa
cggcgcgatgatgtactgcgctttacggctcttgaaatgaaatcgcttgatgtttctact
ggccccattggaccattattaatctctttgccaatcgcgcagtgcacaccaccagtagta
gatcgcatgaaggaaattctgcgttcacatcccggcaaacgcgaagtacatatgcagatc
gatgaccaaggcgtactaacaacgatgaagatcgatgcactcgtaacagcatcgccgagt
ttgagcgcagatctgaaatctatcttggggcccgactgcttagttcgaatgtga
DBGET
integrated database retrieval system
