Candidatus Planktophila lacus: A1s21148_03715
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Entry
A1s21148_03715 CDS
T05050
Name
(GenBank) primosomal protein N' (replication factor Y) (superfamily II helicase)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
plan
Candidatus Planktophila lacus
Pathway
plan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A1s21148_03715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plan03400
]
A1s21148_03715
Enzymes [BR:
plan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A1s21148_03715
DNA repair and recombination proteins [BR:
plan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A1s21148_03715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
ASY10637
UniProt:
A0AAD0DZ49
LinkDB
All DBs
Position
complement(744872..746755)
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AA seq
627 aa
AA seq
DB search
MATARPLRLKREEVKRVDSAQAQHAAFVKVWVDTSVSHLDGTYDYLVPERLSQLVKPGIR
VGVPFAGRDVEALVLERSDKSEITNLKFISSVISEEIVATPALIALISAISKRWICNQFD
VIRSAIPARVASVDKAFTTEFRSSTTKDLANKGKGEVTYLHLAPHEDPLKRLSEFAQKAQ
AKGSVLIIVPEDRELELLKVEIPDALILTSSLSRTHRYSNYLTAINKSGQIIIGTRSAIF
LTPPDLATLIVYRENSQSHYEPRHPGWNVRDVALLRQSEEELNLYFVGYSPSLEMARAID
SSSVKFLSKKARLQVSTFPQGNSELLPERIFSPIRTALKSGSVLFLVPKKGYASALMCKK
CRNLAICPCGGKLSRSNQSAPPTCVHCSTTFSTRKCKWCNEDKLVLLGRGAIRHAEEIGR
AFPGFPVINSDADTPVKEVTGKSSLVIATQGMAPRCEGGYSAAVLLEGGSFFSYSDLRGQ
ERSREAFFEAAGQVKPGAPVLVAIDSSHPINAALASWNPAHMYKRELADLESLDLPPFTR
PLTVDLATSEASTVAEGFKKALLDSRIPASTKVLGPSIRGGDKARIILTASEFDFADLTQ
FVGEFVKHRAIAKKEAMQVRIDPYSLS
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
gtggctacggcgcgtccacttcgcttaaagcgggaagaagtaaagcgagtcgatagcgct
caggcgcagcatgctgcctttgtcaaagtttgggtcgatacttcggtaagccatttagat
ggaacatacgactacttggtacctgaacggctttcgcaattggtaaagcctggaatccgc
gtcggtgttccatttgctggtcgcgatgttgaagcgctagtactggagcgatcagataag
agcgagatcaccaatctaaagttcatctcatctgtaatttcagaggaaatagttgcgact
ccagctctaatagctctgatttcagcaatctccaagcgttggatctgtaatcaattcgat
gtaattagaagcgccataccggcgcgggtggctagcgtcgataaagctttcaccaccgaa
ttcagaagttcgacaacgaaagatttggcgaacaaaggaaaaggggaagttacctatcta
catctagcgccgcatgaagatcccttaaagcgcttaagtgaattcgcgcagaaagctcaa
gcaaagggttccgttctaattatcgttccagaagatcgcgagttagaacttctcaaagtg
gagattccggacgctctcattctgacttcgtcgttgtcacgtacccaccgctattcaaat
tacctcactgctatcaacaaatcgggccagattattatcggtacccggagtgcgatcttt
ttgactccgcctgatttagctaccttgattgtctatcgcgagaattcacagagccattat
gaaccacgtcatccaggctggaatgtgcgagatgtcgcccttctgcgtcagagcgaagag
gaattaaacctttattttgttggctattcaccttcacttgaaatggctcgggccatcgat
tccagttcggtgaaattcttaagtaagaaagcgcgtctgcaggtatcaacatttccgcaa
ggtaattcagagttgttaccggagcgaatcttttctccaatccgaaccgctttaaagtcg
gggtcagtacttttcttagtcccgaagaagggttatgccagtgcattaatgtgtaagaaa
tgtcgcaatctagcgatctgcccttgtggtggaaaactctcgcgctcgaaccagagcgct
ccgcctacttgcgtacattgttcaacgactttctcgacacggaaatgtaaatggtgcaac
gaggacaagttggttttgcttggcaggggagcgatccgtcacgctgaggaaattggacga
gcttttccaggattccccgtaattaattcggatgctgatacaccggttaaagaagtcacc
ggtaagagttcgctagttattgcaacgcagggaatggcgccaagatgtgaaggtggatat
tcggcggcagtccttcttgagggaggatctttcttttcgtactctgatctgcgaggtcag
gaacgatctcgcgaagctttctttgaggcggcggggcaggtaaaaccaggagcaccagtt
ttagttgcgatcgatagtagccacccaataaatgctgctctggctagttggaatccagcg
catatgtataaacgtgaacttgccgatcttgaatctttagatcttccaccatttacgcga
cctttgactgtcgatttagctacctctgaggcgagcacggtcgcagaaggatttaagaag
gctctgcttgattcgcgtattcctgcatcaacaaaggttttggggccatcaatacgaggc
ggagataaggcgagaattattttgacggcgtcggaatttgacttcgccgatctcacacaa
tttgtaggtgagtttgtaaaacatcgcgcgatcgccaagaaagaggcgatgcaagtgcga
atcgacccatattcactctcttaa
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