Candidatus Planktophila lacus: A1s21148_04005
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Entry
A1s21148_04005 CDS
T05050
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
plan
Candidatus Planktophila lacus
Pathway
plan03030
DNA replication
plan03430
Mismatch repair
plan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A1s21148_04005
03430 Mismatch repair
A1s21148_04005
03440 Homologous recombination
A1s21148_04005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plan03032
]
A1s21148_04005
03400 DNA repair and recombination proteins [BR:
plan03400
]
A1s21148_04005
Enzymes [BR:
plan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A1s21148_04005
DNA replication proteins [BR:
plan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A1s21148_04005
DNA repair and recombination proteins [BR:
plan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A1s21148_04005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ASY10686
UniProt:
A0AAD0E4M1
LinkDB
All DBs
Position
800489..801109
Genome browser
AA seq
206 aa
AA seq
DB search
MSVHALSLAETTFVVLDLETSGAAPSTGAAITEIGALKVRGGEIIGEFQSFVNPGHSLPD
FITALTGITDSMLFDAPTIAEILPTFFEFLGSHHETVLVAHNAPFDIGFLKAAAIESENI
WPEFIIVDTVRIARSALGRDEVQDCKLSTLAEFFGASIEPNHRALDDARATVDVMHGIFE
RLGTFGVSTLGELTTFKRKRERKALD
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtacatgcactctctcttgcagaaaccacatttgtagttctcgacctcgaaacc
tcaggggcggccccatcaacaggcgctgcaattaccgagatcggtgccctgaaagttcgg
ggtggcgaaataatcggtgagtttcaaagttttgtaaaccctggtcattcacttcctgat
ttcataacagcgctaactggcataaccgattcgatgctctttgatgcgccaacaattgcc
gaaattcttccaacgttctttgagtttctcggttctcatcacgaaacggttcttgtcgcc
cataatgctccgttcgatattggttttctaaaagcagcagcgattgaaagtgaaaacatt
tggcctgaatttataattgtagatacagttcgaattgccagatctgccttgggtcgcgac
gaggtgcaagattgcaaactatcaaccttggccgaatttttcggggcatctatcgaacct
aaccatcgcgccttagatgatgcccgggctaccgttgatgtcatgcacggaatctttgaa
cgcctcggaacctttggagtatcaacgctcggagagctaacgaccttcaagcgtaagcgt
gaacgtaaagccctagattaa
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