Candidatus Planktophila lacus: A1s21148_04590 Help Entry A1s21148_04590    CDS       T05050                                  Name (GenBank) ribonuclease J   KO K12574   ribonuclease J [EC:3.1.-.-] Organism plan  Candidatus Planktophila lacus Pathway plan03018   RNA degradation Brite KEGG Orthology (KO) [BR:plan00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     A1s21148_04590  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:plan03019]     A1s21148_04590 Messenger RNA biogenesis [BR:plan03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      A1s21148_04590 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Motif Other DBs NCBI-ProteinID:  ASY10787 UniProt:  A0AAD0DZE9 LinkDB All DBs Position complement(914707..916389) Genome browser AA seq 560 aa AA seqDB search MTHPHPELGTPSKLVAGGLRIVALGGLAEIGRNMTVFETNGKLLIVDCGVLFPEENQPGI DLILPDFSYIRDRLADVIGLILTHGHEDHIGATPYLLRERGDIAIYGSALTLALVTAKLK EHRISPLTREVKEGMREDIGPFEVEFVAVNHSIPDALAVAIHTKAGTVLHTGDFKMDQLP LDGRITDLRTFARLGDEGVDLFLVDSTNADVPGFTPAEREIMPALNRVIAATKKRVIVAS FSSHVHRVQQVIDTAAMHNRKVVFIGRSMVRNMKIAEDMGYLNVPAGIVIDAKELDNYDD RVVLICTGSQGEPMAALSRMANGDHQIRVGEGDTVILASSLIPGNENSVFRVINELTRFG AKVVHKANAMVHVSGHAAAGELLYCYNIVKPKYALPVHGEWRHLKANAELAIQSGVPREN TFIIENGIVVDLVDHVAEVAGAVPCGFVYVDGQSIGDITESSLKDRRILGEEGFISVVVV IESQSGKIIAGPDIHARGFNEDEALFDEVKGQIEKALKHAVSEGVNGTHQLSQVVRRTIG SWVGGKHRRRPMIVPVVIEV NT seq 1683 nt NT seq  +upstreamnt  +downstreamnt atgacgcatccccatcccgaactcggtactcctagcaagctagttgctggtgggcttcgt atagtcgcacttggcggattagccgaaatcggtcgcaacatgaccgtctttgaaacaaat ggaaagctcttaattgttgattgtggcgtgctttttcctgaagagaatcaaccaggtatt gatttaatcctgccggactttagttacatccgcgatcgcttagctgatgtcatcggtctg attttaacgcatggccacgaagatcacattggcgcaactccatacctacttcgcgaacgc ggcgatattgcgatctatggttcagcactcaccttggctttagtcactgccaaactcaaa gaacatcgcatctcaccacttactcgcgaagttaaagagggaatgcgcgaagatattggg ccattcgaagttgaattcgttgcggttaaccactcaattcctgatgctttagccgttgct attcatacaaaagctggcacggttcttcacactggcgattttaagatggatcaattacca ctcgatgggcgtattaccgatctgcgcaccttcgcgcgcttaggcgatgaaggcgtcgat ctattcttagttgattcaactaacgcagatgttcctggatttacccctgctgaacgcgag attatgccagcgctaaatcgcgtaattgccgcaaccaagaagcgtgtaatcgtggcctca ttttcatcccatgttcaccgcgtccaacaagtaattgacacggcagcgatgcataaccgg aaagttgttttcatcgggcgctccatggttcgcaatatgaagatcgccgaggatatgggc tacttaaatgtgccagccggaattgttatcgatgctaaggaacttgataactacgatgat cgtgtcgttctgatttgtaccggctcacaaggcgaaccgatggctgcgctatctcgaatg gctaatggcgatcatcagatacgcgttggtgaaggcgacaccgttatcctggcttcttca ctcatccccggcaatgaaaattcagtatttagagtcatcaacgaattaactcgttttggc gccaaggttgtacataaagcaaatgcgatggttcacgtttcaggacatgccgccgcaggg gagttgctctactgctacaacatcgtgaaaccaaagtacgccctgccggtgcatggtgaa tggcgccacttaaaggccaacgccgagctagcaattcaatctggagttcctcgcgaaaat acctttattatcgaaaacggaatcgtggttgatttggtagaccatgttgcggaagttgct ggtgccgtaccttgtggttttgtttacgtcgatggtcaaagcatcggagatatcaccgaa tcatctttgaaagatcgccgcatattaggagaagaaggatttatctctgtcgtagtagta attgagtcacagagcggaaagatcatcgccggccctgatatccatgcacgtggatttaat gaagatgaagcgctctttgatgaagttaaggggcagatcgaaaaagccttaaagcacgcg gtttctgaaggtgtaaatggaactcatcaactttctcaagtagtccgacgcacaatcggc agttgggtcggcggaaaacatcgccgccgtccgatgatcgttcccgtagttattgaggtc tga

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