Candidatus Planktophila lacus: A1s21148_04645
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Entry
A1s21148_04645 CDS
T05050
Name
(GenBank) tRNA pseudouridine55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
plan
Candidatus Planktophila lacus
Brite
KEGG Orthology (KO) [BR:
plan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plan03016
]
A1s21148_04645
Enzymes [BR:
plan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A1s21148_04645
Transfer RNA biogenesis [BR:
plan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A1s21148_04645
Prokaryotic type
A1s21148_04645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ASY10798
UniProt:
A0AAC9YSQ5
LinkDB
All DBs
Position
complement(925070..925942)
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AA seq
290 aa
AA seq
DB search
MDGFLVVDKAPAMTSHDVVAVARKALGTRKVGHAGTLDPMATGVLVLGFGNGTRLLQYIT
DGDKSYLATVVLGAATVTDDQEGEVISEADTSMITDEEIRSGLSKMVGEIQQRPSSVSAV
KVAGERAYDRVRAGEVFELAARTITISSLEVLDIRRTGARIEIDIDVTCSAGTFIRAIAR
DLGSELAVGGHLSALRRTRVAGFAIDQAITFDALKAQEFKTLDLADVARATFSVRELALD
EVAELSFGRPLPSNTGEDIFAALSPDNRLIALLKNESGKAKPIAVFAAAN
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggatggctttttagttgtagataaagcacctgccatgactagccatgatgttgtggca
gttgcgcgtaaggcacttggtacacgcaaagttggccatgctggcaccttagatccgatg
gcaactggcgtacttgtacttggttttggtaacggaactcgtttattgcagtacatcacc
gatggcgacaagtcttatcttgcaacagttgttttaggcgcggcaacagtcaccgacgac
caagaaggtgaagtcatttctgaagcagatacgtcaatgattaccgacgaagaaattaga
tcgggcctttccaaaatggtgggggagattcaacaacgtcccagttcagtatccgctgta
aaggttgcaggagagcgcgcctatgaccgagtacgtgcgggcgaagtatttgagctagct
gctcgcaccatcacaatttcatctttagaagtattagatattcgccgtactggtgctcga
atcgaaattgatattgatgtcacttgttctgctggaactttcatccgcgcgatcgcacgc
gatctaggcagcgaattagccgttggtggccatttgtcagcgctgcgccgtacgcgagtt
gctggctttgcaattgatcaggcgattaccttcgatgcgctcaaggcgcaagagtttaaa
actttagatttagcagatgtagcgcgtgccacattctcggtccgcgagctggcgctagat
gaagttgcagaactttcatttggcagaccactaccttcaaatactggcgaagatattttt
gcggcgctctcaccagataaccgccttatcgctcttttaaagaacgaatccggcaaggca
aaaccgatcgcagtttttgcagcggcgaattaa
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