KEGG   Candidatus Planktophila lacus: A1s21148_05005
Entry
A1s21148_05005    CDS       T05050                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K06020  energy-dependent translational throttle protein EttA
Organism
plan  Candidatus Planktophila lacus
Brite
KEGG Orthology (KO) [BR:plan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:plan03016]
    A1s21148_05005
Transfer RNA biogenesis [BR:plan03016]
 Prokaryotic type
  tRNA transport factors
   tRNA export factors
    A1s21148_05005
SSDB
Motif
Pfam: ABC_tran AAA_21 ABC_tran_Xtn SMC_N AAA_29 AAA_23 AAA_22 AAA_27 AAA_15 Dynamin_N cobW NB-ARC DLIC VapE-like_dom
Other DBs
NCBI-ProteinID: ASY10860
UniProt: A0AAC9YRM3
LinkDB
Position
complement(1000387..1002054)
AA seq 555 aa
MAEFIYTMKKARKAHGEKVILDDVTLMFYPGAKIGVVGPNGAGKSTVLQIMAGLQQPSNG
EAYLTPGYTVGILMQEPILNEEKNVIDNVKEGVAETVAMLDRFNAISDEMSQPDADYDKL
LAEMGDLQEKLDHRNAWELDSQLEQAMDALRCPPPDADVKVLSGGEKRRVALCKLLLEAP
DLLLLDEPTNHLDAESVLWLEQHLNKYPGAVVAITHDRYFLDNVAQWILELDRGRAYPYE
GNYSTYLETKATRLKIEGQKDAKRAKRLTEELEWVRQNAKGRQVKSKARLARYEEMAAEA
DKMRKLDFDEIQIPPGPRLGNVVVEVENLVKGFGDRILIDNLSFTLPRNGIVGVIGPNGA
GKTTLFKTILGLEQPDSGTVKIGETVKIAYVDQSRGGIDPTKSLWEVVSDGLDFIKVGQV
EMPSRAYVSAFGFKGPDQQKKAGVLSGGERNRLNLALTLKLGGNLLLLDEPTNDLDVETL
GSLENALLEFPGCAVVISHDRWFLDRVATHILAYEGDSSWFWFEGNFESYEENKISRLGA
DAARPHRATYRKLTR
NT seq 1668 nt   +upstreamnt  +downstreamnt
atggctgagttcatttacacgatgaaaaaggcgcgcaaagcgcatggtgaaaaggtaatt
ctcgacgatgtcaccttgatgttctatcccggagcaaagattggcgtggtcggccctaac
ggcgccggtaagtcaacggtcttgcagatcatggccggcttacagcaaccatctaatggt
gaggcatacctaactcctggttacaccgtcggcatcttgatgcaggaaccaattttaaat
gaagagaagaatgtaattgataacgttaaagagggcgttgccgaaactgttgcaatgctc
gatcgcttcaatgcaatcagcgatgagatgtcacagcctgatgctgattacgacaagtta
cttgccgaaatgggcgaccttcaggaaaagcttgatcaccgaaatgcctgggagcttgat
tcacaacttgagcaggcgatggatgccctgcgctgtccaccacctgatgccgatgtaaag
gttttatctggtggagaaaagcgccgcgttgcactttgtaagttgttgttagaggcccca
gatcttttgcttctcgatgaaccaacaaaccaccttgatgccgaatctgttttatggctg
gaacaacatttaaataaatatccgggcgcagtcgttgcgattactcacgatcggtacttc
ctcgacaacgtcgcacaatggatcctcgaactcgatcgtggtcgcgcttatccatatgaa
ggtaactactcaacttatctcgagaccaaggcaacgcgtctgaaaatcgaaggacagaaa
gatgccaagcgcgctaagcgtttaactgaagaacttgaatgggttcgccagaatgcaaag
gggcgccaagttaaatcaaaggcgcgtcttgctcgttacgaagaaatggcggcagaggcc
gacaagatgcgtaagttggactttgatgaaattcaaattccacctgggccacgtttagga
aatgttgttgttgaggtagaaaacttggttaaaggatttggcgatcgcatcttgatcgat
aacctttcattcactttgccgcgcaacggaatcgttggagtcattgggccaaacggtgcc
ggaaagacaacgctcttcaaaacaatcttaggtttagagcaaccagattctggaacggta
aagattggtgaaactgtaaagatcgcctacgtcgatcagtcacgcggtggaatcgatcca
acgaaatcactttgggaggttgtctcagacggtttggactttattaaggtcggacaagtt
gaaatgccatctcgcgcatatgtatctgcatttggatttaagggccctgatcagcagaag
aaagccggcgtactttcaggtggagaacgtaaccgtttgaacttggcgttgactttaaag
ctcggtggaaacctattacttctcgatgagccaacgaacgatctcgatgtagaaacactt
ggttcccttgaaaatgcgctgctggaatttccgggttgtgcagtggtgatctctcacgat
cgttggttccttgaccgtgtagcaacacatatcttggcctacgaaggcgattccagttgg
ttctggttcgaaggaaacttcgaatcttatgaagaaaataagatctctcgccttggtgca
gatgccgcgcgtccgcaccgtgcgacctaccgaaagctaacccgttaa

DBGET integrated database retrieval system