Candidatus Planktophila lacus: A1s21148_05005
Help
Entry
A1s21148_05005 CDS
T05050
Name
(GenBank) excinuclease ABC subunit A
KO
K06020
energy-dependent translational throttle protein EttA
Organism
plan
Candidatus Planktophila lacus
Brite
KEGG Orthology (KO) [BR:
plan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plan03016
]
A1s21148_05005
Transfer RNA biogenesis [BR:
plan03016
]
Prokaryotic type
tRNA transport factors
tRNA export factors
A1s21148_05005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
AAA_29
AAA_23
AAA_22
AAA_27
AAA_15
Dynamin_N
cobW
NB-ARC
DLIC
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
ASY10860
UniProt:
A0AAC9YRM3
LinkDB
All DBs
Position
complement(1000387..1002054)
Genome browser
AA seq
555 aa
AA seq
DB search
MAEFIYTMKKARKAHGEKVILDDVTLMFYPGAKIGVVGPNGAGKSTVLQIMAGLQQPSNG
EAYLTPGYTVGILMQEPILNEEKNVIDNVKEGVAETVAMLDRFNAISDEMSQPDADYDKL
LAEMGDLQEKLDHRNAWELDSQLEQAMDALRCPPPDADVKVLSGGEKRRVALCKLLLEAP
DLLLLDEPTNHLDAESVLWLEQHLNKYPGAVVAITHDRYFLDNVAQWILELDRGRAYPYE
GNYSTYLETKATRLKIEGQKDAKRAKRLTEELEWVRQNAKGRQVKSKARLARYEEMAAEA
DKMRKLDFDEIQIPPGPRLGNVVVEVENLVKGFGDRILIDNLSFTLPRNGIVGVIGPNGA
GKTTLFKTILGLEQPDSGTVKIGETVKIAYVDQSRGGIDPTKSLWEVVSDGLDFIKVGQV
EMPSRAYVSAFGFKGPDQQKKAGVLSGGERNRLNLALTLKLGGNLLLLDEPTNDLDVETL
GSLENALLEFPGCAVVISHDRWFLDRVATHILAYEGDSSWFWFEGNFESYEENKISRLGA
DAARPHRATYRKLTR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttcatttacacgatgaaaaaggcgcgcaaagcgcatggtgaaaaggtaatt
ctcgacgatgtcaccttgatgttctatcccggagcaaagattggcgtggtcggccctaac
ggcgccggtaagtcaacggtcttgcagatcatggccggcttacagcaaccatctaatggt
gaggcatacctaactcctggttacaccgtcggcatcttgatgcaggaaccaattttaaat
gaagagaagaatgtaattgataacgttaaagagggcgttgccgaaactgttgcaatgctc
gatcgcttcaatgcaatcagcgatgagatgtcacagcctgatgctgattacgacaagtta
cttgccgaaatgggcgaccttcaggaaaagcttgatcaccgaaatgcctgggagcttgat
tcacaacttgagcaggcgatggatgccctgcgctgtccaccacctgatgccgatgtaaag
gttttatctggtggagaaaagcgccgcgttgcactttgtaagttgttgttagaggcccca
gatcttttgcttctcgatgaaccaacaaaccaccttgatgccgaatctgttttatggctg
gaacaacatttaaataaatatccgggcgcagtcgttgcgattactcacgatcggtacttc
ctcgacaacgtcgcacaatggatcctcgaactcgatcgtggtcgcgcttatccatatgaa
ggtaactactcaacttatctcgagaccaaggcaacgcgtctgaaaatcgaaggacagaaa
gatgccaagcgcgctaagcgtttaactgaagaacttgaatgggttcgccagaatgcaaag
gggcgccaagttaaatcaaaggcgcgtcttgctcgttacgaagaaatggcggcagaggcc
gacaagatgcgtaagttggactttgatgaaattcaaattccacctgggccacgtttagga
aatgttgttgttgaggtagaaaacttggttaaaggatttggcgatcgcatcttgatcgat
aacctttcattcactttgccgcgcaacggaatcgttggagtcattgggccaaacggtgcc
ggaaagacaacgctcttcaaaacaatcttaggtttagagcaaccagattctggaacggta
aagattggtgaaactgtaaagatcgcctacgtcgatcagtcacgcggtggaatcgatcca
acgaaatcactttgggaggttgtctcagacggtttggactttattaaggtcggacaagtt
gaaatgccatctcgcgcatatgtatctgcatttggatttaagggccctgatcagcagaag
aaagccggcgtactttcaggtggagaacgtaaccgtttgaacttggcgttgactttaaag
ctcggtggaaacctattacttctcgatgagccaacgaacgatctcgatgtagaaacactt
ggttcccttgaaaatgcgctgctggaatttccgggttgtgcagtggtgatctctcacgat
cgttggttccttgaccgtgtagcaacacatatcttggcctacgaaggcgattccagttgg
ttctggttcgaaggaaacttcgaatcttatgaagaaaataagatctctcgccttggtgca
gatgccgcgcgtccgcaccgtgcgacctaccgaaagctaacccgttaa
DBGET
integrated database retrieval system