Candidatus Planktophila lacus: A1s21148_05460
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Entry
A1s21148_05460 CDS
T05050
Name
(GenBank) ATP-dependent RNA helicase RhlE
Organism
plan
Candidatus Planktophila lacus
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
UTP25_NTPase-like
zf-CCHC_3
Motif
Other DBs
NCBI-ProteinID:
ASY10936
UniProt:
A0AAC9YR61
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Position
1093279..1094628
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AA seq
449 aa
AA seq
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MSITFADLPLRPETQAALAEHGFKSPFPIQEMVLPIALGDGDVIGQAKTGTGKTLAFGIP
LIERVIAPLDKEWDALVAKGLPQVLVVVPTRELCVQVTKDIEELTGNRGIRTLAVYGGRA
FEPQIEALEKGVEIVVGTPGRLLDLYRQGQLKLKEVSRVVLDEADEMLDLGFLPDVEKIF
TSTPNRAQTMLFSATMPGDIIALARRFMNQPIHIRTQDNEDEGAVVSRIKQYVLRAHALD
KIEMLARILQADGRGPTIVFCRTKRTCQKTSDDLSERGFRAASIHGDLGQSAREKALNDF
KAGKSDVLVATDVAARGIDIDGITHVINYQCPEDEKTYVHRIGRTARAGADGISVTFVDW
DDLARWKMIDTALTLGLGEPEETYSSSEHLYEMLNIPAGSTGRMVKAKPVSEAPSKEPAK
SSPTKDKSAKEKNEDRTARVRTRTKKFTS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
gtgtctataacttttgccgatctcccgctgcgtcctgagactcaagcggctcttgctgaa
catggtttcaaatcgccctttccaattcaagagatggttctaccaatcgcactcggcgat
ggtgatgtaatcggtcaagcaaagactggcactggcaagacgttggcttttggtattccc
cttatcgaacgagtaatcgcaccgctggataaagagtgggatgcacttgttgcaaagggg
ctgccccaggttcttgttgttgttccaacgcgcgaactttgtgtgcaagtaacaaaagat
attgaagagttaaccggtaaccgcggaatccgcaccttagctgtttacggtggacgcgcc
tttgaaccgcaaatcgaagcccttgaaaaaggcgtagaaattgtggttggcacaccgggc
agactcttagatctatatcgccaaggacaattaaagttaaaggaagtctctcgcgttgtt
ctagatgaagctgatgaaatgctcgatctaggatttcttccggatgtagaaaaaatcttc
acgagcactccaaaccgcgcgcaaacaatgcttttttcagcaacaatgcctggagatatc
atcgctttggcgcgtaggtttatgaaccaaccaattcatattcgcactcaagataatgaa
gatgagggcgcggttgtctctcgcatcaagcagtatgttctgcgtgcacacgccctcgat
aagatcgagatgttggcgcgaattctgcaagccgatggccgcggaccaaccatcgttttc
tgccgtactaagcgcacctgccagaagacatctgatgatttatcagaacgtggcttccgc
gctgcttcaattcatggcgatcttggacagagcgcgcgcgagaaagcgcttaacgacttt
aaggccggtaaatctgatgttttagttgcaacagatgtagccgctcgcggaatcgacatt
gatggaataactcacgtaattaactatcaatgcccggaagatgaaaaaacttacgtgcac
cgtatcggccgcactgctcgtgctggtgcagatggaatctccgtaacttttgttgactgg
gatgatttagcgcgctggaagatgattgatactgcgctaactctgggcctaggtgaacct
gaagagacgtactcatcatcagagcacctatatgaaatgttaaatattccagcaggttct
accggtcgaatggtgaaagctaagccagtaagtgaagctccaagcaaagagccagcaaag
tcctctccaactaaagacaagtcggcaaaagagaagaacgaagaccgtaccgctcgggta
cgaacccgcaccaagaaatttacttcttaa
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