Candidatus Planktophila lacus: A1s21148_05750
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Entry
A1s21148_05750 CDS
T05050
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plan
Candidatus Planktophila lacus
Pathway
plan03420
Nucleotide excision repair
plan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A1s21148_05750
03430 Mismatch repair
A1s21148_05750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plan03400
]
A1s21148_05750
Enzymes [BR:
plan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A1s21148_05750
DNA repair and recombination proteins [BR:
plan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A1s21148_05750
MMR (mismatch excision repair)
Other MMR factors
A1s21148_05750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
LisH_WDR26
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ASY11379
UniProt:
A0AAC9YSH0
LinkDB
All DBs
Position
complement(1149333..1151612)
Genome browser
AA seq
759 aa
AA seq
DB search
MVDTQALLAGLNPQQQKAVASEGAPLLVVAGAGSGKTRVLTRRIAYLMAARSVKPYEILA
ITFTNKAAGEMKDRVTELVGPIAKSMWVSTFHSACVRLLRQEIERLGYSSTFSIYDSADS
QKLISRVMETLNLDPKRYPARQFQSLISNAKNELQTPYQYLSAAQNQFETIVADVYTMYE
KRLKQANALDFDDLIMKTVQVLQQFPETKARFRSRFRHILVDEYQDTNHAQYVLVKELTG
TEGDGFPVAELCVVGDADQSIYGFRGATIRNILQFEVDYPNAATVLLEQNYRSTQNILNA
ANAVITQNESRKEKNLWSDAGAGAPLVGYVAESEYDEAEFVKSEIRSLQDMGYSNPGDTA
VFYRTNAQSRIFEEIFMRAAIPYKVVGGLRFYERKEVKDLLAYLRVLANPDDEVSLRRII
NFPKRGVGDRALEEVEIFSQANGISFWQALLRVTEATSVPNKAAQSIGTFTSMLTALSVL
VEAKTKPSVIIEAVLEQSGLLTELEASTDPQDEVRVENLKELVSASMEYEERPIEELGED
EEISLSGFLEKVSLVADADDIPDKQSDSGLNGLPDGEDHGGVVTLMTLHTAKGLEFPTVF
LTGMEDGIFPHARTLDDPKEIEEERRLAYVGLTRAEKRLYISRAEYRLTFGTPKYNPGSR
FLDEIPTDLIEWKNEARSSSSSGSSGLRRRTPTTPPPRATGKTSSAMVLEVGQRVSHDTF
GLGTVVALAGEGDKSEATINFGQYGEKRLLLRYAPVVVL
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggttgatacgcaagcgctactggcggggctcaatccgcagcagcagaaagcggttgcc
agcgaaggcgcacctcttttagtggtggcaggtgcgggatctggaaagacgcgagttcta
actcgtcgtatcgcttacttaatggcggctcgttcagttaaaccctacgaaattttggcg
atcacttttaccaataaagcagctggtgagatgaaagatcgcgtcaccgaacttgtaggt
ccgatcgcaaaatcaatgtgggtctcaacttttcactctgcctgtgtgcgcttactgcgc
caagagatagaacgtctgggatatagcagcaccttcagcatctacgactccgctgattcg
cagaagttgatttcgcgagtgatggagactcttaatcttgatcccaagcgctatcccgca
cgccaattccaatcactaatttcaaatgccaagaacgagctgcaaactccttatcaatat
ctatctgcggcgcaaaaccaatttgaaaccatcgtcgccgatgtttacacgatgtatgaa
aaacgtctgaagcaggccaacgctttagatttcgatgatttgattatgaagaccgtgcag
gtcttgcagcaattccctgaaaccaaggcgcgctttcgttcccgctttcgccacatcctt
gtagatgaataccaggacaccaaccacgcacaatatgttttagttaaagagctcaccggc
accgaaggcgatggttttccagttgccgagctttgcgtggtgggcgatgccgatcaatct
atctacggtttccgcggtgcaacgatccgcaatattttgcagtttgaagttgattacccg
aacgcggccaccgtcttgctcgaacaaaattaccgttcgacacaaaatatccttaacgca
gcgaacgcagttattacacagaatgaatctcgtaaagagaagaacttgtggtctgatgct
ggtgctggtgcgccgctagttggttatgtcgccgaatccgaatatgacgaagccgaattc
gtaaagtcagagattcgctcactgcaagatatgggttactccaatccaggagatactgcg
gttttctatcgcacaaatgcccaatctcgtatctttgaagaaatctttatgcgcgctgcc
attccttacaaagtcgttgggggtttgcgcttctacgaacgaaaagaagttaaagatctc
cttgcctacctgcgcgtgctggctaacccagatgatgaagtctcgctgcgccgcatcatc
aactttccaaaacgcggggttggcgatcgcgccctcgaagaagtggaaatcttttcgcag
gccaacggaatctctttctggcaagctttattaagagtaaccgaggcaaccagcgttccc
aataaagcggcgcaatccatcggcacatttacctcaatgcttaccgccctttctgtactc
gttgaggcaaagaccaagccatctgtgattatcgaagcggtccttgagcaatcaggtttg
ctcaccgaacttgaagcgagcaccgatccgcaagatgaagtacgagttgaaaacttaaaa
gaacttgtctcggcatcaatggaatatgaagaacgcccaattgaagagctcggtgaagat
gaagaaatttcgctatctggattcctggaaaaagtttcgctagttgccgatgctgacgac
attcccgataagcaaagcgattcgggattgaatggattgcccgatggtgaagatcatggg
ggagttgttaccttgatgactctgcacaccgccaaaggtctggaatttccaacggtattt
cttactggcatggaagatggaatctttccgcacgcacgtaccttggatgatcccaaagag
attgaagaagaacgtcgcttggcatacgttggtttaacgcgcgctgaaaaaagactttat
atttcgcgtgcggagtatcgtttaactttcggaactcctaaatacaaccctggttcaaga
ttcttagatgaaattccaactgatttaatcgaatggaagaacgaagcgcgttcctcatct
tcatctggaagttctggacttcgccgtcgtactccgacaacacctccgccgagagcgacc
ggcaaaacatcttctgcgatggttcttgaagttggtcagcgtgtgtcacatgacacattc
ggtcttggcaccgttgtggcgctagcgggtgaaggcgataaatcagaggcgacgatcaac
ttcggccaatacggcgaaaaacgcctcttgctgcgctatgcccctgttgtggttttgtag
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integrated database retrieval system
