Plantibacter sp. PA-3-X8: EAO79_11225
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Entry
EAO79_11225 CDS
T05731
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plap
Plantibacter sp. PA-3-X8
Pathway
plap03420
Nucleotide excision repair
plap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EAO79_11225
03430 Mismatch repair
EAO79_11225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plap03400
]
EAO79_11225
Enzymes [BR:
plap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EAO79_11225
DNA repair and recombination proteins [BR:
plap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EAO79_11225
MMR (mismatch excision repair)
Other MMR factors
EAO79_11225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AZH84994
LinkDB
All DBs
Position
2357914..2361159
Genome browser
AA seq
1081 aa
AA seq
DB search
MLAGLLGLPQPTTQQVEVIEAPMAPVLVVAGAGSGKTETMASRVVWLLANRHVSVDGILG
LTFTRKAAGELAARIGKRIAALQDIGILDPAADALFDRPEVSTYNAYANALFRDNALLVG
REPESVLLSEASAWRLARRVVVRHGDERLATLGKSVDQVAELVLSLSHELAEIDGTIEEL
LGFVERFVGIGELPDGGRGAYAQIDQAVEVVGALPVLLDLAHRYADEKRRQGLVEFSDQV
ALALAACERSPKVAAVARDRAGVVLLDEYQDTSVVQTRLLSTLFADHPVMAVGDPHQSIY
GWRGASAANLARFSRDFGREVAATQFNLSTSWRNDRTVLEAANVLVRPLQQQAQTAGKLR
VLDLEPKPGAGAGSLAVEFPETGAEEIRVVAEWCADRLLAERGGDPAGSAAILFRARRPM
QEFADGLAALGVPHHILGLGGLLSSPEIVDVTAALRVIHDPGAGSSLIRLLSGPRWRIGV
HDLGHLVEVARYLQAIDWKTKRYDAELAARLRESVADDDGRSIIDALDFIAADRVPAGLA
AGFTDEARSRLREAGLVFASLRRRAGSGLPDLVRAVERELRLDIEVVANESTGSAARAPA
RLQAFHDEVISFIQAEEQVTLGSLLAWIDRSLARDDLGPASDAPDQGAVQLLTIHGSKGL
EWDHVAIPRLVVDELPAKPKDGKGWVRLGTLPYDFRGDAAELPEFAWRTAETRKEVVDAQ
LAFSEALGERALDEERRLAYVAVTRAKHDLLLTGSFWSGDRKRPRAASTYLLELAAAGVI
APLPAASAFEENPVDAGAAVLDWPLDPLGARRSVVERAAAEVDQRRGRPEAELLATLGPL
ENELTLLLEERRRAATTTARGELPVRIPASKFKEFVTEPEAALERLRRPVPQRPYRQTRL
GTRFHSWVEAHYGRFGLQELVDALPEELDVERPGPDASEGIGFDELTERFLASEWADVRP
IEVETEIHVPLGDTGRVVVCKLDAVFERGDRFEIVDWKTGAVPTTPEDVRNASFQLALYR
LAYAHHREVDPERIDAVLYYVSHDVQLRPERLYSEEELLSEWERSFGEAAESQSSNDEVS
I
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccggcctgctcggcctcccacaaccgacgacgcagcaggtcgaggtcatcgag
gcccccatggcgcccgtgctcgtcgtcgccggtgccgggagcgggaagaccgagaccatg
gcgtcacgcgtcgtgtggctgctcgccaaccggcacgtgagcgtcgacgggatcctgggg
ctcaccttcaccaggaaggccgcgggcgagctggcggcgcggatcggcaagcggatcgcg
gccctgcaggacatcgggatcctggatcccgcggccgacgcgctcttcgaccgtcccgag
gtgtccacctacaacgcctatgcgaacgccctgttccgcgacaacgccctcctggtgggc
cgtgagcccgagtccgtgctgctgtcggaggcgtccgcctggcgactcgcgaggcgcgtc
gtggtccggcacggagacgaacggctcgccaccctcggcaagtccgtcgaccaggtggcc
gagctcgtcctctcgctgagccatgagctcgccgagatcgacggcaccatcgaggagctg
ctcggcttcgtggaacggttcgtcggcatcggcgagctccccgacggtggtcgcggtgcc
tacgcgcagatcgaccaggccgtcgaggtcgtgggtgccctgccggtcctgctcgacctc
gcgcaccggtacgccgacgagaagcgccggcagggactcgtggagttctccgaccaggtc
gccctcgccctcgccgcctgcgaacgttcaccgaaggtcgccgccgtcgcacgtgatcgc
gcgggcgtcgtcctgctcgacgagtaccaggacacctcggtcgtgcagaccagactgctg
tcgaccctgttcgccgaccaccccgtcatggcggtcggcgacccgcaccagtccatctac
ggctggcgcggcgcgagcgcggcgaacctcgcacggttctcacgcgacttcggtcgggag
gtcgccgccacccagttcaacctgtccacgagttggcggaacgaccgcacggtcctcgaa
gccgcgaacgtcctcgtccgcccgttgcagcagcaggcgcagacggcggggaagctgcga
gtcctcgacctcgagccgaagcccggcgccggggccggctccctcgccgtcgagttcccc
gagaccggtgccgaggagatccgggtggtcgccgagtggtgcgcggaccgcttgctcgcc
gaacgcgggggagatccggccggttcggccgcgatcctgttccgggcgcgtcgaccgatg
caggagttcgccgacggcctcgcggcgctcggcgtcccccaccacatcctcggcctcggc
ggtctgctctcctcgccggagatcgtcgacgtgacggcggcactgcgggtcatccacgat
cccggtgccgggtcctcgctcatcagactcttaagcgggcctcgctggcggatcggcgtc
cacgacctcggacacctcgtggaggtggcccggtacctgcaggccatcgactggaagacg
aagcggtacgacgccgaactggccgcccggctccgtgagtcggtcgccgacgacgacggg
cggtcgatcatcgacgcgctcgacttcatcgccgcggaccgcgtgccggcgggcctcgcc
gcagggttcaccgacgaggcgcgttcgcgtctccgggaggccggactggtgttcgcctcc
ctgcggcgtcgtgcgggcagcggcctccccgatctcgtcagagcggtcgagcgcgagttg
cggctcgacatcgaggtcgtcgcgaacgagtcgaccggctccgcggcgcgcgctccggcc
agactgcaggccttccacgacgaggtcatctcgttcatccaggcggaggagcaggtgacg
ctcggcagcctgctggcgtggatcgaccgatcgctcgcccgagacgacctcggaccggcg
agcgacgcacccgaccagggtgcggtccaattgctcaccatccacggttcgaagggcctc
gagtgggatcatgtcgcgatcccgcggctcgtggtcgacgaactgccagccaagccgaag
gacggtaaaggctgggtgcgtctcgggacactgccgtacgactttcgaggcgacgcggcg
gagctgccggagttcgcctggcggacggccgagacgcggaaggaggtcgtcgacgctcag
ctcgccttctcggaggcgctcggcgaacgcgcgctcgacgaggaacgccggctcgcgtat
gtggcggtgacccgcgccaagcacgacctcctgctcaccggctcgttctggtcgggcgat
cgcaagcggccccgtgctgcgagcacctacctcctggagctggccgcggcgggcgtcatc
gcgccgctccccgcagcctccgccttcgaggagaacccggtcgacgccggtgctgcggtc
ctcgactggccactcgatccgctcggcgcgcgtcggagcgtcgtcgagcgggcggcggcc
gaggtcgaccagcggcgcggacggcccgaggccgagctgctggcgaccctcggtcccctc
gagaacgagctgacgctgctcctcgaggaacgacgccgtgccgcgacgacgaccgcgcgc
ggtgaactccccgtgcgcatccccgcgtccaagttcaaggagttcgtcacggaaccggag
gccgcactcgaacgtctgcgtcgccccgtcccgcagcggccctaccggcagacccgtctc
ggcacccggttccattcgtgggtcgaggcgcactacggacgcttcggattgcaggagctg
gtcgacgcgctccccgaggagctcgacgtcgaacgcccggggccggacgcgtcggagggg
atcgggttcgacgagctcaccgagcggttcctcgcctcggaatgggcggacgtacgaccg
atcgaggtcgagaccgagatccacgtgccgctcggcgacaccggacgggtggtggtctgc
aagctcgacgcggtgttcgagcgcggggaccggttcgagatcgtcgactggaagaccggc
gcggtacccacgacgccggaggacgtgcggaacgcctcgttccagctcgcgctctaccgt
ctggcgtacgcgcaccaccgggaggtcgaccccgagcgcatcgacgccgtgctctactac
gtgagccacgacgtgcagctccggccggaacgcctctactcggaggaggagctcctgtcg
gagtgggagcggtccttcggggaggccgccgagtcccagagctcgaacgacgaggtgtcg
atctga
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