Plantibacter sp. PA-3-X8: EAO79_13580
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Entry
EAO79_13580 CDS
T05731
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
plap
Plantibacter sp. PA-3-X8
Brite
KEGG Orthology (KO) [BR:
plap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plap03016
]
EAO79_13580
Enzymes [BR:
plap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EAO79_13580
Transfer RNA biogenesis [BR:
plap03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EAO79_13580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
FlgD_ig
Motif
Other DBs
NCBI-ProteinID:
AZH83810
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All DBs
Position
complement(2873134..2874381)
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AA seq
415 aa
AA seq
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MSDAAPESAPLLPPPAPTAPRVVTDTREAYLASLEVLAAGHGPFALDAERASGYRYSQRA
YLIQVYRRGAGVFLYDPPAIGSMAELGALIQGERSILHAASQDLACLREVGIDPSELFDT
ELGARLLGLPRVGLGAVVEELLGIHLAKEHSAADWSTRPLPASWLEYAALDVELLVDAAE
ELAARIEDAGKSDIARQEFQATLAREAKAPRAEPWRRLSGLHAVRGQRNLAVARELWVAR
DELAQRRDTAPGRLIPDASITAAAKANPGSKRDLAALSDFRGRASRTELDLWWNAIHTGQ
TTEDLPGARPASDTLPPPRSWSDKNPDAHARYTAARTKILATAEFLTMPVENLLTPETLR
RLAWTPPEPLTVETVAAALAEHEARPWQIDATARAITDAFVESAQSPAEPDPDAS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgacgcggcgcccgaatcagcaccgctcctccccccgcccgcgcccaccgcacca
cgggtcgtcaccgacacccgcgaggcctacctcgcctcactcgaggtgctcgccgcgggt
cacggaccgttcgcgctcgacgccgaacgcgcgtcgggttaccggtactcccagcgcgcc
tacctcatccaggtctaccgtcgcggtgccggggtcttcctctacgacccgcccgccatc
ggctccatggccgaactcggcgccctgatccagggtgaacgctcgatcctgcacgcggcc
agccaggacctcgcctgtctgcgcgaagtgggcatcgacccgagcgagctcttcgacacc
gagctgggggcccgtctgctcgggctgccgcgtgtcgggctcggcgcagtggtcgaggaa
ctgttgggcatccatctggcgaaagagcactccgccgccgactggtcgacccgcccgctc
cccgcctcctggctcgaatacgcggcgctcgacgtcgagttgctcgtcgacgccgcggag
gaactggccgcccgcatcgaggacgccgggaagagcgacatcgcgcgccaggagttccag
gcgacgctcgcccgagaggcgaaggcaccccgcgccgagccctggcgccgcctctccgga
ctccacgccgtgcgcggacaacgcaacctcgccgtcgctcgcgagctctgggtcgcgcgt
gacgaactcgcgcagcgccgcgacaccgcccccgggcggctcatccccgacgcctcgatc
accgcggccgcgaaggccaaccccggctcgaagcgcgacctcgcagcgctctcggacttc
cgtgggcgcgcgagccgcaccgaactcgacctctggtggaacgcgatccacaccggccag
accaccgaggacctccccggtgcccgaccggcgagcgacacgctgccacccccgcgcagc
tggtccgacaagaacccggacgcgcacgccaggtacaccgcggcacggacgaagatcctc
gcgacggcggagttcctgacgatgccggtcgagaacctgctcacgccggagacgctgcgc
cgactggcctggacgccgcccgaaccgctcaccgtcgagacggtcgccgcggcactcgcc
gagcacgaggcacgcccctggcagatcgacgcgaccgcccgggcgatcaccgacgccttt
gtcgagtcggcccaatccccggcggagcctgacccggacgcttcgtag
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